{"id":"W2804600887","doi":"10.1101/323923","title":"The <i>Pseudomonas aeruginosa</i> PilSR two-component system regulates both twitching and swimming motilities","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Pilus; Biology; Flagellum; Regulon; Virulence; Mutant; Swarming motility; Pseudomonas aeruginosa; Biofilm; Type three secretion system; Motility; Microbiology; Pilin; Cell biology; Pathogenicity island; Gene; Operon; Genetics; Quorum sensing; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007119951,0.0004839353,0.0001880829,0.0004123348,0.0001608273,0.0002820185,0.0001308887,0.0001877459,0.0009553895],"category_scores_gemma":[0.0001180083,0.0001341538,0.0002480392,0.000166399,0.0002052345,0.0001411999,0.0002698452,0.0003323035,0.0004787374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002959049,"about_ca_system_score_gemma":0.0001662451,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001050333,"about_ca_topic_score_gemma":0.0009943121,"domain_scores_codex":[0.9998124,0.00002146262,0.00001052733,0.00004516777,0.00005792852,0.00005250843],"domain_scores_gemma":[0.9998527,0.00001942881,0.00005603814,0.00001506287,0.00002651281,0.00003038306],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001504276,0.000004234287,0.0003850337,0.000008138057,0.000001164686,0.00001918694,0.000003233041,0.00001634833,0.9991314,0.00001739256,0.0000254643,0.0003734138],"study_design_scores_gemma":[0.000008338799,0.0001748459,0.08487328,0.00001156737,0.00002199853,0.0005839188,0.00009726148,0.002149734,0.909778,0.00009595304,0.002192592,0.00001248216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939884,0.0006994731,0.002327714,0.0001493639,0.00001492228,0.0000157207,0.0007839038,0.0002833032,0.001737227],"genre_scores_gemma":[0.9955555,0.0001867339,0.001060996,0.00008469538,0.000007121174,0.00001571972,0.001129551,0.00003568814,0.001923995],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001050333,"threshold_uncertainty_score":0.00319612,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00723687587269637,"score_gpt":0.199000678275279,"score_spread":0.1917638024025827,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}