{"id":"W2805298028","doi":"10.1007/978-1-4939-7804-5_2","title":"Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"ca_institutions":"Concordia University","funders":"Génome Québec; Genome Canada","keywords":"DNA extraction; genomic DNA; Genotyping; Biology; Polymerase chain reaction; DNA; Digital polymerase chain reaction; Multiple displacement amplification; Genome; DNA microarray; Molecular biology; Chromatography; Chemistry; Gene; Genetics; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002134419,0.00226172,0.002019739,0.004674156,0.001474514,0.001309288,0.002494515,0.00165772,0.01172768],"category_scores_gemma":[0.005159227,0.001735621,0.002329488,0.003354207,0.0007626608,0.001033771,0.001698107,0.003957335,0.01779297],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005672143,"about_ca_system_score_gemma":0.001614768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002537172,"about_ca_topic_score_gemma":0.008841808,"domain_scores_codex":[0.9958586,0.0005642842,0.0005069586,0.001343186,0.001303093,0.0004238813],"domain_scores_gemma":[0.9966378,0.0009871994,0.0003687716,0.001082417,0.0007523005,0.0001714121],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002347332,0.0002001933,0.001374468,0.0005655639,0.00007794282,0.0001406938,0.0001235507,0.0004574208,0.917379,0.001030455,0.007151753,0.07126427],"study_design_scores_gemma":[0.00016907,0.0005474554,0.01471971,0.0003123462,0.0004324565,0.0008848982,0.0001470167,0.006733282,0.8090528,0.003953281,0.1629039,0.0001438443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.0166822,0.002016623,0.9414427,0.0004246394,0.0004821456,0.002724927,0.02187844,0.008072865,0.006275428],"genre_scores_gemma":[0.03283525,0.002954544,0.8967163,0.0007149834,0.0001861496,0.003938925,0.05281461,0.001682588,0.008156669],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01172768,"threshold_uncertainty_score":0.03923303,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03160989763235059,"score_gpt":0.3929154981949874,"score_spread":0.3613056005626368,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}