{"id":"W2805355421","doi":"10.1016/j.biochi.2018.06.002","title":"G4RNA screener web server: User focused interface for RNA G-quadruplex prediction","year":2018,"lang":"en","type":"article","venue":"Biochimie","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Bottleneck; Computer science; Interface (matter); Identification (biology); Focus (optics); Software deployment; RNA; Web server; World Wide Web; Computational biology; Biology; Operating system; The Internet; Embedded system; Genetics; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009737038,0.003440096,0.00195486,0.001949588,0.0007943144,0.001317223,0.002312466,0.001318564,0.1053507],"category_scores_gemma":[0.001888115,0.001293178,0.001367872,0.0009096391,0.000225377,0.00105079,0.00122598,0.001128627,0.05351964],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004788207,"about_ca_system_score_gemma":0.0008873005,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001723282,"about_ca_topic_score_gemma":0.002357663,"domain_scores_codex":[0.9996282,0.00005409431,0.0000383791,0.0001154319,0.00009819926,0.00006575112],"domain_scores_gemma":[0.999473,0.0002741225,0.00004345947,0.00005887697,0.00009071433,0.00005981236],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004116362,0.0005974866,0.007278943,0.002683445,0.0004986458,0.001120345,0.0002915027,0.002743844,0.09346604,0.002046642,0.7554672,0.1296895],"study_design_scores_gemma":[0.002118585,0.0006859469,0.0206636,0.000456432,0.0005924858,0.002129404,0.0002220993,0.1192804,0.3831921,0.007442823,0.4625967,0.0006194512],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.0163284,0.0005773749,0.1197737,0.0002241833,0.0002229667,0.0005642161,0.1295004,0.7250955,0.00771328],"genre_scores_gemma":[0.1111692,0.0009853805,0.2544281,0.00144457,0.0002234384,0.004067716,0.4839451,0.1069111,0.03682551],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.1053507,"threshold_uncertainty_score":0.3524332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01222942949596277,"score_gpt":0.2534312844582852,"score_spread":0.2412018549623224,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}