{"id":"W2806303726","doi":"10.1093/glycob/cwx089","title":"Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes","year":2017,"lang":"en","type":"article","venue":"Glycobiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":217,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Goddard Space Flight Center; University of the Ryukyus; Natural Sciences and Engineering Research Council of Canada; Norges Miljø- og Biovitenskapelige Universitet; Oulun Yliopisto; Hokkaido University; Universidad de Zaragoza; Danmarks Tekniske Universitet; Centre National de la Recherche Scientifique; Nuclear Physics; University of Waterloo; Sveriges Lantbruksuniversitet; RIKEN; Tokyo University of Agriculture; Simon Fraser University; University of Lethbridge; KU Leuven; Aalto-Yliopisto; University of St Andrews; Universiteit Utrecht; Rijksuniversiteit Groningen; University of Leeds; Wilfrid Laurier University; Slovenská Akadémia Vied; Kungliga Tekniska Högskolan; Pennsylvania State University; Weizmann Institute of Science; Itä-Suomen Yliopisto; Biotechnology and Biological Sciences Research Council; Institut National de la Recherche Agronomique; Université de Sherbrooke; National Institute of Advanced Industrial Science and Technology; Iowa State University; Queen Mary University of London; Newcastle University; Kindai University; Universiteit Gent; University of Pennsylvania; Tokyo University of Agriculture and Technology; Kagoshima University; Akita Prefectural University; U.S. Department of Agriculture","keywords":"Encyclopedia; Carbohydrate; Enzyme; Chemistry; Biochemistry; Library science; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002552513,0.001811582,0.002191742,0.009988227,0.001004957,0.00731934,0.002051735,0.001297477,0.01628533],"category_scores_gemma":[0.006999595,0.0007327617,0.001252049,0.01349758,0.001280342,0.006890558,0.005120155,0.003838666,0.01711914],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001284769,"about_ca_system_score_gemma":0.003694864,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001612551,"about_ca_topic_score_gemma":0.002223932,"domain_scores_codex":[0.9983888,0.0002270466,0.0003026057,0.0003702782,0.0005500693,0.000161183],"domain_scores_gemma":[0.9962091,0.001279905,0.0003080444,0.0007206665,0.000784195,0.0006981287],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0004228644,0.00008844066,0.0009770747,0.005853432,0.0001469575,0.0004349264,0.00079195,0.001377932,0.01626036,0.0370813,0.3906156,0.5459492],"study_design_scores_gemma":[0.000005174327,0.00001085809,0.000406823,0.0003507719,0.00001848196,0.0001971548,0.00005117506,0.0002229038,0.001626532,0.00387088,0.9932172,0.0000221454],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"empirical","genre_scores_codex":[0.0198211,0.4103783,0.2445625,0.01580071,0.01877726,0.0006669181,0.1339215,0.0544531,0.1016187],"genre_scores_gemma":[0.035754,0.3293674,0.2822584,0.007341692,0.005977783,0.001002117,0.2336116,0.01802949,0.08665759],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01628533,"threshold_uncertainty_score":0.05447984,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007606905816401456,"score_gpt":0.2427554763441995,"score_spread":0.2351485705277981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}