{"id":"W2806773722","doi":"10.1007/s11274-018-2469-9","title":"Biotransformation of benzo[a]pyrene by the thermophilic bacterium Bacillus licheniformis M2-7","year":2018,"lang":"en","type":"article","venue":"World Journal of Microbiology and Biotechnology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":38,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"Consejo Nacional de Ciencia y Tecnología; Secretaría de Educación Pública; U.S. Environmental Protection Agency","keywords":"Biotransformation; Bacillus licheniformis; Thermophile; Pyrene; Chemistry; Bacteria; Phthalic acid; Mesophile; Biocatalysis; Biochemistry; Enzyme; Food science; Stereochemistry; Organic chemistry; Biology; Bacillus subtilis; Reaction mechanism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004189749,0.0001245973,0.0002191623,0.0001099639,0.0001056065,0.000006913224,0.0003294353,0.0002596612,0.00102087],"category_scores_gemma":[0.00002344461,0.00007278054,0.00006126836,0.0002993592,0.001463769,0.00008469357,0.00009526758,0.0002497141,0.00005721937],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003302602,"about_ca_system_score_gemma":0.00001338716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001824207,"about_ca_topic_score_gemma":0.0002097599,"domain_scores_codex":[0.9991011,0.00006891941,0.0004484981,0.0001280664,0.00004985644,0.0002035796],"domain_scores_gemma":[0.9993609,0.00003627971,0.0003934788,0.000140145,0.00003129328,0.00003794999],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007388539,0.00003462369,0.001222622,0.000003469992,0.00002628994,7.532108e-7,0.0001297138,2.030194e-7,0.9749187,0.00005700298,0.004713467,0.01881929],"study_design_scores_gemma":[0.0003930704,0.0004067659,0.00232812,0.00001070864,0.0000200007,0.0002726089,0.00005637091,0.000003485756,0.8488646,0.00009095869,0.1474671,0.00008620883],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905881,0.0003964968,0.00009026667,0.008025471,0.0002049232,0.00009881458,0.00004511133,0.00001090746,0.0005398876],"genre_scores_gemma":[0.9984673,0.0004819264,0.0002515884,0.0005683722,0.0000400554,3.253268e-7,0.000007423658,0.000004783242,0.0001782192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1427537,"threshold_uncertainty_score":0.9998924,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005169918028880676,"score_gpt":0.1936892760389556,"score_spread":0.1885193580100749,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}