{"id":"W2807125638","doi":"10.1186/s40168-018-0484-6","title":"Oral microbiota in youth with perinatally acquired HIV infection","year":2018,"lang":"en","type":"article","venue":"Microbiome","topic":"HIV/AIDS oral health manifestations","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Center for Advancing Translational Sciences; National Institute of Child Health and Human Development; National Institute of Mental Health; National Institutes of Health; Public Health Agency of Canada; National Institute of Allergy and Infectious Diseases; Harvard T.H. Chan School of Public Health","keywords":"Prevotella; Biology; Tannerella forsythia; Microbiome; Periodontitis; Dysbiosis; Cohort; Immunology; Internal medicine; Medicine; Gut flora","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002279648,0.0002222762,0.0002520935,0.0005541096,0.000486337,0.0005662185,0.0001502626,0.0002524576,0.001064258],"category_scores_gemma":[0.001032795,0.0001632466,0.0001221642,0.0004127017,0.0001726027,0.0002605183,0.0004591871,0.0002945233,0.0001229917],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002451116,"about_ca_system_score_gemma":0.0002355918,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005155378,"about_ca_topic_score_gemma":0.005522077,"domain_scores_codex":[0.9998461,0.00002965568,0.00001214015,0.00003113661,0.00002775079,0.00005316009],"domain_scores_gemma":[0.9997818,0.00002966163,0.00008406866,0.000007817433,0.00003910454,0.00005761496],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007941807,0.00002695555,0.9946062,0.00001724977,0.0000111415,0.0002663961,0.0003973868,0.00001073285,0.0005853194,0.00001896934,0.00006924292,0.003910989],"study_design_scores_gemma":[0.000002113913,0.0001675404,0.9968619,0.00003058723,0.00001819537,0.0009382229,0.001524707,0.00005706638,0.0002173065,0.00002761785,0.0001526667,0.000002060772],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993543,0.000356931,0.00002252044,0.00001097912,0.000002066114,0.000003848298,0.00009032141,0.00000126515,0.0001578032],"genre_scores_gemma":[0.9994555,0.0002984716,0.00006399503,0.00001455967,0.00000226106,0.00000561704,0.00009059334,7.004791e-7,0.00006839388],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005155378,"threshold_uncertainty_score":0.01025075,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02273911979560042,"score_gpt":0.2981274873841369,"score_spread":0.2753883675885365,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}