{"id":"W2807672853","doi":"10.1101/338863","title":"An Atlas of Human and Murine Genetic Influences on Osteoporosis","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; McGill University; McGill University and Génome Québec Innovation Centre; Jewish General Hospital","funders":"Diamantina Institute, University of Queensland; National Health and Medical Research Council; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Medical Research Council; Fonds de Recherche du Québec - Santé; National Institutes of Health; National Institute for Health and Care Research; Novo Nordisk; ZonMw; Canadian Institutes of Health Research; University of Queensland; Stiftelsen för Strategisk Forskning; European Commission; Knut och Alice Wallenbergs Stiftelse; Ernest Heine Family Foundation; King's College London; Vetenskapsrådet; Australian Government; Sahlgrenska Universitetssjukhuset; Wellcome Trust","keywords":"Osteoporosis; Bone mineral; Gene; Genome-wide association study; Biology; Human genome; Chromatin; Phenotype; Bone density; Single-nucleotide polymorphism; Genetics; Quantitative trait locus; Genome; Bioinformatics; Computational biology; Endocrinology; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004586946,0.0004752736,0.0004123364,0.00287474,0.0004453076,0.0005772664,0.0003938268,0.0003826022,0.01967212],"category_scores_gemma":[0.0003881392,0.000341187,0.0004071394,0.002440326,0.0002786169,0.0002272794,0.0006754932,0.0004984095,0.004864746],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004392457,"about_ca_system_score_gemma":0.000697771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001701453,"about_ca_topic_score_gemma":0.00415917,"domain_scores_codex":[0.9996735,0.00005615226,0.00002336006,0.00008601547,0.0001306829,0.00003021997],"domain_scores_gemma":[0.9995455,0.0001370936,0.00008940218,0.0001126184,0.00005975979,0.00005553024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009711113,0.0001054384,0.01391554,0.002086865,0.0003980871,0.002222048,0.0003993788,0.009366447,0.5796618,0.02297411,0.151171,0.2167283],"study_design_scores_gemma":[0.000122433,0.0002745838,0.07171302,0.000215776,0.0002721621,0.004483211,0.0001002137,0.006753639,0.05249918,0.01425421,0.8492414,0.00007018937],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.174086,0.01881789,0.2187979,0.002094599,0.0009203626,0.0003537667,0.4808185,0.0296449,0.07446608],"genre_scores_gemma":[0.3860081,0.01647465,0.2660065,0.001291205,0.000299448,0.0008999112,0.2787013,0.003429298,0.04688949],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01967212,"threshold_uncertainty_score":0.06580985,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01226466527769218,"score_gpt":0.260632791792661,"score_spread":0.2483681265149688,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}