{"id":"W2807780209","doi":"10.1111/nph.15259","title":"White seed color in common bean (<i>Phaseolus vulgaris</i>) results from convergent evolution in the <i>P</i> (<i>pigment</i>) gene","year":2018,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":110,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Phaseolus; Genetics; Allele; Gene; White (mutation); Phenotype; Quantitative trait locus; Genome-wide association study; Botany; Genotype; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005537113,0.0002257817,0.0003211888,0.0000242545,0.0002098098,0.00006155625,0.0005458445,0.000191356,0.00008533098],"category_scores_gemma":[0.00004637899,0.0000852821,0.00008288849,0.0005455188,0.0001658636,0.00008760569,0.00008431346,0.0002313967,0.00007436437],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001009544,"about_ca_system_score_gemma":0.00002804964,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005521044,"about_ca_topic_score_gemma":0.1587053,"domain_scores_codex":[0.9979383,0.0002669198,0.0004932096,0.0005222606,0.0002949039,0.0004843511],"domain_scores_gemma":[0.9992898,0.0002251866,0.0001895614,0.0001626116,0.00003766263,0.00009514448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0011978,0.0004474822,0.09153119,0.000003704727,0.00001509315,0.0001636734,0.0005368516,0.00003624011,0.8936518,0.0005436818,0.009126374,0.002746154],"study_design_scores_gemma":[0.002024786,0.0006846036,0.9499615,0.00005877353,0.00002105455,0.00001834146,0.0008729908,0.0004316015,0.02644404,0.003675961,0.01538956,0.0004167252],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992749,0.0003333336,0.00005620337,0.003141546,0.0004903933,0.0004300593,0.00071671,0.00005299372,0.002029713],"genre_scores_gemma":[0.9973558,0.00007632467,0.0001769912,0.001069411,0.0005222515,0.00002194594,0.000441448,0.000001642001,0.0003341753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8672077,"threshold_uncertainty_score":0.8566461,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01977164666085841,"score_gpt":0.2247147848380694,"score_spread":0.204943138177211,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}