{"id":"W2807901568","doi":"10.1038/s41467-018-04365-8","title":"IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":252,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Mount Sinai Hospital; Hospital for Sick Children; Montreal Heart Institute; University of Toronto; Royal Victoria Hospital; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Walloon excellence in life sciences and biotechnology; Nederlandse Federatie van Universitair Medische Centra; National Cancer Institute; Institut National Du Cancer; Belgian Federal Science Policy Office; National Institute of Diabetes and Digestive and Kidney Diseases; Fonds De La Recherche Scientifique - FNRS; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; RIKEN; Japan Agency for Medical Research and Development","keywords":"Gene; Genetics; Biology; Computational biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003991674,0.0002378291,0.0003749334,0.0009125255,0.0002164854,0.0003379725,0.0001695522,0.0002678503,0.001858175],"category_scores_gemma":[0.0008591663,0.0002077908,0.0004425693,0.0007767536,0.000241984,0.0001313483,0.0004092687,0.0003057372,0.0002416267],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001389242,"about_ca_system_score_gemma":0.0001396643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006924862,"about_ca_topic_score_gemma":0.001132702,"domain_scores_codex":[0.9996526,0.00006106477,0.00002199038,0.0001390557,0.00006175583,0.00006346202],"domain_scores_gemma":[0.9992612,0.0003426957,0.0002225547,0.00006513176,0.00002926606,0.00007917299],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001317233,0.000119346,0.2633741,0.0001333914,0.000315054,0.0007042735,0.0002876309,0.001128694,0.7141674,0.000809506,0.0004120431,0.01723143],"study_design_scores_gemma":[0.00005414223,0.0001359016,0.9749805,0.00001834294,0.0001822,0.000907692,0.00007640733,0.00289102,0.01888494,0.0008009017,0.001053615,0.0000144735],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997371,0.0002389975,0.001629886,0.00002691082,0.000002736432,0.000005998595,0.0004232304,0.00004927747,0.0002520006],"genre_scores_gemma":[0.9971718,0.00007916131,0.001630423,0.00005030762,0.000006053521,0.0000102409,0.0008277,0.00001881132,0.0002054193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001858175,"threshold_uncertainty_score":0.006216228,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02253458620875133,"score_gpt":0.3358512523015711,"score_spread":0.3133166660928198,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}