{"id":"W2808181305","doi":"10.1534/g3.118.200118","title":"Detecting<i>de Novo</i>Homoeologous Recombination Events in Cultivated<i>Brassica napus</i>Using a Genome-Wide SNP Array","year":2018,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; Agriculture and Agri-Food Canada","keywords":"Biology; Brassica; Genome; Genetics; Ploidy; SNP array; Chromosome; Recombination; Aneuploidy; Genome evolution; Gene; Single-nucleotide polymorphism; Botany; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003524604,0.0003097074,0.0002954309,0.00006508545,0.00044361,0.00005583236,0.0004679973,0.0002398399,0.0003358535],"category_scores_gemma":[0.00003075158,0.0001745618,0.0001249969,0.0008729161,0.000118074,0.0000706667,0.000159637,0.0001692034,0.00009625718],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001872253,"about_ca_system_score_gemma":0.00006739479,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001243055,"about_ca_topic_score_gemma":0.002028439,"domain_scores_codex":[0.997691,0.0001945505,0.0005112891,0.0006031619,0.0002738169,0.0007261779],"domain_scores_gemma":[0.999082,0.0001457891,0.0002144832,0.000180181,0.0001953021,0.0001821943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001895364,0.0001312634,0.1727699,0.000006947705,0.00002233913,0.000004250039,0.0004678877,0.0002639572,0.6023281,0.000007989875,0.000006369104,0.2239721],"study_design_scores_gemma":[0.001319415,0.001361702,0.6438776,0.00006963416,0.00009739817,0.0001596204,0.000819028,0.002620983,0.1957099,0.005443851,0.1471099,0.001411007],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9849828,0.01286608,0.0002404649,0.0005174733,0.0004278735,0.0004362898,0.00003875764,0.00008473967,0.0004055015],"genre_scores_gemma":[0.9911482,0.003622661,0.003734454,0.0003664035,0.0007625554,0.00003418038,0.00007782724,0.000007548117,0.0002462142],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4711077,"threshold_uncertainty_score":0.7118422,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02767519306942728,"score_gpt":0.2470771827607904,"score_spread":0.2194019896913631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}