{"id":"W2808461923","doi":"10.7150/jgen.25648","title":"Genome Wide Analysis Reveals the Extrinsic Cellulolytic and Biohydrogen Generating Abilities of <i>Neocallimastigomycota</i> Fungi","year":2018,"lang":"en","type":"article","venue":"Journal of Genomics","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Gene; Carbohydrate-binding module; Genome; Lignin; Cell wall; Cellulase; Metagenomics; Archaea; Microbiology; Glycoside hydrolase; Biochemistry; Cellulose; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004202036,0.0000988938,0.0003166285,0.00003875848,0.0001511241,0.00003141431,0.000200622,0.0000500055,0.00007569794],"category_scores_gemma":[0.00006887064,0.00003473781,0.0001832102,0.000338258,0.000280464,0.00006813238,0.00006041516,0.00008714834,0.000003404088],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000232675,"about_ca_system_score_gemma":0.00001500169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000166558,"about_ca_topic_score_gemma":0.00003552402,"domain_scores_codex":[0.9990349,0.0001045811,0.0004636658,0.0001212199,0.0001164597,0.000159123],"domain_scores_gemma":[0.9988071,0.0004011618,0.0004337072,0.00005669982,0.0002259043,0.00007543552],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004807781,0.00003486983,0.01948258,0.000005676887,0.0001105601,0.000002143875,0.000167834,0.00005323489,0.9780893,0.00008152035,0.00004778129,0.001876427],"study_design_scores_gemma":[0.0004608715,0.002057217,0.8809816,0.00003744644,0.0006525104,0.0001205756,0.001995818,0.0007600795,0.09433509,0.004239931,0.01400953,0.0003492974],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971724,0.00192602,0.0000530709,0.0005942672,0.00005970085,0.00006887436,0.00001895888,0.000003353156,0.0001033398],"genre_scores_gemma":[0.9982789,0.0006195305,0.0003812432,0.0002336561,0.0004289103,8.350137e-7,0.000004827621,9.229429e-7,0.00005120597],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8837542,"threshold_uncertainty_score":0.1416567,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01761061680149814,"score_gpt":0.2128087855949528,"score_spread":0.1951981687934547,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}