{"id":"W2808482937","doi":"10.1186/s13100-018-0125-4","title":"Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes","year":2018,"lang":"en","type":"article","venue":"Mobile DNA","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Natural Resources Canada; McGill University; Canadian Forest Service; Ministry of Agriculture","funders":"National High-tech Research and Development Program; Natural Science Foundation of Jiangxi Province; National Natural Science Foundation of China; Agence Nationale de la Recherche","keywords":"Biology; Transposable element; Genome; Inverted repeat; Genetics; Genome evolution; Mobile genetic elements; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000650381,0.00008391355,0.0001256945,0.00001431972,0.00007321856,0.00001044362,0.0001470453,0.00007613372,0.001133067],"category_scores_gemma":[0.000008903247,0.00003447659,0.00004868432,0.0003373615,0.00005240765,0.00004988509,0.00002864868,0.00004950905,0.00003282819],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001529716,"about_ca_system_score_gemma":0.000007875733,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001773911,"about_ca_topic_score_gemma":0.003673321,"domain_scores_codex":[0.9992743,0.00003650094,0.0002160987,0.0001855644,0.0001190304,0.0001684686],"domain_scores_gemma":[0.9997769,0.00003138551,0.0000520144,0.00005236176,0.00004556545,0.00004177877],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002245776,0.0001586993,0.06870058,0.000004724934,0.000007689667,0.000001383919,0.0004650366,0.00000320448,0.9137326,0.00005088409,0.0001755612,0.01667718],"study_design_scores_gemma":[0.0009056682,0.001676474,0.6013906,0.00006355196,0.00002348148,0.000003609724,0.0006837587,0.0006078152,0.3453858,0.001548342,0.04736301,0.0003479184],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984779,0.0001368643,3.641551e-7,0.0001452268,0.00008022829,0.0002158192,0.0000582897,0.00002053627,0.0008647809],"genre_scores_gemma":[0.9992636,0.00003033068,0.0001063632,0.00008704318,0.0001213677,0.00002912136,0.0001024563,6.706252e-7,0.0002589847],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5683469,"threshold_uncertainty_score":0.9997801,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01155949081880871,"score_gpt":0.2124727390862207,"score_spread":0.2009132482674119,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}