{"id":"W2808675457","doi":"10.1016/j.ympev.2018.06.013","title":"Cryptic genetic diversity, population structure, and gene flow in the Mojave rattlesnake (Crotalus scutulatus)","year":2018,"lang":"en","type":"article","venue":"Molecular Phylogenetics and Evolution","topic":"Amphibian and Reptile Biology","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Dahlem Research School, Freie Universität Berlin; California Department of Fish and Wildlife; Secretaría de Medio Ambiente y Recursos Naturales; Prairie Biotic Research; Sigma Xia; Calgary Laboratory Services; Nevada Department of Wildlife; Neurosurgery Research and Education Foundation; New Mexico Department of Game and Fish; Innovative Research Group Project of the National Natural Science Foundation of China; University of Texas at Arlington; Dow Chemical Company; Southwestern Association of Naturalists; National Sleep Foundation; Southern California Academy of Sciences; Texas Parks and Wildlife Department; University of California Institute for Mexico and the United States; National Science Foundation","keywords":"Biology; Coalescent theory; Gene flow; Subspecies; Population; Phylogeography; Evolutionary biology; Genetic divergence; Genetic diversity; Approximate Bayesian computation; Range (aeronautics); Effective population size; Ecology; Genetic variation; Phylogenetic tree; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004302046,0.0001394189,0.0002084337,0.001327874,0.0004567311,0.0003824782,0.0003778994,0.000296967,0.0006924777],"category_scores_gemma":[0.0007791333,0.0001797304,0.0001486535,0.0005747618,0.0009340281,0.0003406961,0.0004488452,0.0003311003,0.0001134559],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003506003,"about_ca_system_score_gemma":0.0001998455,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005308155,"about_ca_topic_score_gemma":0.01618678,"domain_scores_codex":[0.999725,0.00007286239,0.00001651826,0.0001095782,0.00003043962,0.00004555209],"domain_scores_gemma":[0.9995565,0.0001185839,0.0001640834,0.00003758003,0.00005333306,0.00006993497],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006160531,0.0001473598,0.9401356,0.00003162126,0.0002354506,0.0001442694,0.001455553,0.001460015,0.0408885,0.0009438812,0.00009547118,0.01384614],"study_design_scores_gemma":[0.00001163387,0.00005062523,0.996883,0.00000586976,0.00002800335,0.0001154553,0.0003012726,0.002048878,0.0002263568,0.0002554124,0.00006687715,0.000006610263],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998511,0.00002026176,0.00005303498,0.000006434296,4.536343e-7,3.968887e-7,0.000007436382,0.000001019656,0.00005988802],"genre_scores_gemma":[0.9998596,0.000009716561,0.00006578295,0.000004514701,0.000001157967,8.726294e-7,0.00002165373,9.739398e-7,0.00003560677],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005308155,"threshold_uncertainty_score":0.01055449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005266161425474364,"score_gpt":0.1910759827475415,"score_spread":0.1858098213220671,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}