{"id":"W2808797700","doi":"10.1101/352138","title":"Epigenetic analysis identifies factors driving racial disparity in prostate cancer","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia","funders":"Prostate Cancer Foundation","keywords":"Prostate cancer; Epigenetics; Methylation; Wnt signaling pathway; DNA methylation; Biology; Cancer; Gene; Prostate; Genetics; Cancer research; Oncology; Bioinformatics; Medicine; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004283917,0.0001034906,0.0002199123,0.0005708946,0.0003146632,0.0004291559,0.0001495541,0.0001853344,0.002416137],"category_scores_gemma":[0.001183815,0.00008910488,0.000340387,0.0008724395,0.0001411426,0.000124933,0.0003068876,0.0002684713,0.000152981],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001758262,"about_ca_system_score_gemma":0.0002291392,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003407498,"about_ca_topic_score_gemma":0.004254102,"domain_scores_codex":[0.9996543,0.00009787776,0.00002315887,0.0001175898,0.0000530388,0.00005410595],"domain_scores_gemma":[0.9996346,0.00007580104,0.0001635974,0.00004344681,0.00004464574,0.00003779695],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005346164,0.00004357209,0.9510408,0.00009195087,0.0003897943,0.0001303827,0.000310123,0.0004067139,0.02758553,0.0004652925,0.000768901,0.01823234],"study_design_scores_gemma":[0.000005060958,0.00004789506,0.994663,0.00001192955,0.0001202243,0.0002234867,0.0001536212,0.000743093,0.002247777,0.0002876009,0.001490675,0.000005511823],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953556,0.001111571,0.00107002,0.000186244,0.00001513872,0.00001100837,0.0015008,0.00001556211,0.0007340487],"genre_scores_gemma":[0.998652,0.0001649617,0.0003200212,0.00005386542,0.000008739038,0.000005412791,0.0006215827,0.000005862074,0.0001676497],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003407498,"threshold_uncertainty_score":0.008082747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02196717693489065,"score_gpt":0.2959794688621957,"score_spread":0.274012291927305,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}