{"id":"W2808821352","doi":"10.1093/neuonc/noy059.010","title":"ATRT-11. MOLECULAR SUBGROUPS OF ATYPICAL TERATOID/RHABDOID TUMOR (ATRT): TOWARDS A CONSENSUS","year":2018,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Chromatin Remodeling and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; SickKids Foundation; Occupational Cancer Research Centre; Hospital for Sick Children","funders":"","keywords":"Atypical teratoid rhabdoid tumor; DNA methylation; SMARCB1; Biology; Cancer research; Transcriptome; Wnt signaling pathway; Bioinformatics; Epigenetics; Gene; Genetics; Gene expression; Chromatin remodeling; Medulloblastoma","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002202337,0.0002485529,0.0003973077,0.00005898608,0.0000791652,0.0000128819,0.0003051239,0.0003047049,0.000104659],"category_scores_gemma":[0.0003190015,0.0002390247,0.0001968567,0.0001330037,0.0005014818,0.000002231013,0.0002095766,0.0001849053,0.00003533182],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005091578,"about_ca_system_score_gemma":0.000535476,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006193443,"about_ca_topic_score_gemma":0.0001116858,"domain_scores_codex":[0.9981258,0.0002244326,0.0004654026,0.000570713,0.0001975696,0.00041609],"domain_scores_gemma":[0.9987571,0.00005549213,0.0002016079,0.0005585172,0.0002689409,0.0001583268],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004755853,0.0001310195,0.0005786465,0.0000277146,0.00004198109,0.00008260113,0.00007343656,0.00003121444,0.9840807,0.0001380141,0.006653891,0.007685212],"study_design_scores_gemma":[0.001280358,0.002097647,0.000308927,0.00001397046,0.00004319524,0.0003735983,0.00005383096,0.0005027247,0.7809952,0.0001259976,0.2139685,0.0002360569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931859,0.0004998493,0.0009629113,0.0008247572,0.0006592084,0.0002272029,0.00003371722,0.00003507668,0.003571392],"genre_scores_gemma":[0.9943047,0.00006033214,0.002322799,0.002527538,0.0006208186,0.00002555779,0.00003317243,0.00004588427,0.00005918089],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2073146,"threshold_uncertainty_score":0.9747145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01253281783592387,"score_gpt":0.2871141989230279,"score_spread":0.2745813810871041,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}