{"id":"W2808837575","doi":"10.1101/352930","title":"Selective sweeps in populations of the broad host range plant pathogenic fungus <i>Sclerotinia sclerotiorum</i>","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agence Nationale de la Recherche; Curtin University of Technology; Grains Research and Development Corporation","keywords":"Sclerotinia sclerotiorum; Biology; Population; Gene flow; Sclerotinia; Genotype; Genetic diversity; Selection (genetic algorithm); Population genetics; Genetics; Evolutionary biology; Genetic variation; Gene; Botany; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003968851,0.0001463383,0.0002523498,0.000703847,0.000387173,0.0003777796,0.0001881918,0.00023376,0.0006663313],"category_scores_gemma":[0.0005872838,0.0001094702,0.0002027939,0.0005400425,0.0003655215,0.0001318463,0.0002664405,0.0002491527,0.00009925565],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003074217,"about_ca_system_score_gemma":0.0001662509,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003671424,"about_ca_topic_score_gemma":0.007786306,"domain_scores_codex":[0.999729,0.00006158445,0.00001822827,0.00009962625,0.000046893,0.00004475816],"domain_scores_gemma":[0.9992973,0.0001906924,0.0002833339,0.00004497678,0.00009801875,0.00008576828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004819985,0.00008054871,0.5663756,0.0001067335,0.0002950677,0.0004702451,0.001570106,0.0005327013,0.4162909,0.0002015412,0.0001524671,0.01344195],"study_design_scores_gemma":[0.000007863936,0.000110995,0.9950818,0.000007551358,0.00003191714,0.0003633718,0.0002483469,0.0003098785,0.003403994,0.0000342419,0.0003927641,0.000007265506],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996465,0.00005971495,0.0000822162,0.000005742821,7.76621e-7,0.000002527881,0.00004852851,0.000002239643,0.0001517239],"genre_scores_gemma":[0.9996574,0.00002229588,0.0001322337,0.00001258227,0.00000148679,0.000002520567,0.0001127465,0.000001532699,0.00005721676],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003671424,"threshold_uncertainty_score":0.007300138,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02236864967553998,"score_gpt":0.198040323452733,"score_spread":0.175671673777193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}