{"id":"W2809425473","doi":"10.1038/s41598-018-28071-z","title":"Endospore forming bacteria may be associated with maintenance of surgically-induced remission in Crohn’s disease","year":2018,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; University of Alberta","funders":"Alberta Innovates","keywords":"Lachnospiraceae; Firmicutes; Gastroenterology; Endospore; Microecology; Dysbiosis; Clostridiales; Crohn's disease; Medicine; Disease; Surgery; Internal medicine; Fusobacteria; Microbiology; Biology; Clostridiaceae; Bacteria; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004257027,0.0002326804,0.0003878488,0.0007632123,0.0002872912,0.0005205838,0.0001836254,0.0004323656,0.000736861],"category_scores_gemma":[0.00200472,0.0001361126,0.0002561944,0.0006467572,0.0003081165,0.0003087034,0.0003387418,0.0006006394,0.0001359172],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000193134,"about_ca_system_score_gemma":0.0001538812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008037382,"about_ca_topic_score_gemma":0.001000046,"domain_scores_codex":[0.9996822,0.00007828714,0.00003835177,0.00005639946,0.00007635244,0.00006837462],"domain_scores_gemma":[0.9982554,0.0002341279,0.001032118,0.00007217078,0.0001301152,0.0002761017],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001293092,0.0001064609,0.9760863,0.00003991976,0.00005766729,0.0005601298,0.0001172544,0.00006221428,0.01190027,0.00002332125,0.00005986547,0.009693469],"study_design_scores_gemma":[0.000004017375,0.0001619732,0.9986517,0.000004231587,0.00001848474,0.0005423258,0.00005586008,0.00009015673,0.0003674469,0.00001768151,0.00008356627,0.000002524326],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9989319,0.0007715363,0.0000681259,0.00003280324,0.00000443,0.000002596355,0.0000313643,0.000004277772,0.0001530151],"genre_scores_gemma":[0.9994168,0.0002331042,0.0001359563,0.0000136822,0.00001037189,0.000002440927,0.00009732338,0.000001797972,0.00008850238],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008037382,"threshold_uncertainty_score":0.002465069,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01102335245033762,"score_gpt":0.2433112843090947,"score_spread":0.2322879318587571,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}