{"id":"W2809502079","doi":"10.1128/jcm.00731-18","title":"Multiplex PCR Analysis for Rapid Detection of Klebsiella pneumoniae Carbapenem-Resistant (Sequence Type 258 [ST258] and ST11) and Hypervirulent (ST23, ST65, ST86, and ST375) Strains","year":2018,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":109,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Klebsiella pneumoniae; Microbiology; Multiplex polymerase chain reaction; Biology; Multiplex; Virology; Carbapenem; Enterobacteriaceae; Polymerase chain reaction; Gene; Antibiotics; Escherichia coli; Bioinformatics; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001025381,0.0001855095,0.0007148039,0.0001056169,0.00007297353,0.00002147951,0.0001649753,0.000356598,0.00001189009],"category_scores_gemma":[0.0006878971,0.0001495194,0.0001966867,0.0001128418,0.0008660118,0.00001005028,0.0001085332,0.0001713406,4.930199e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001125812,"about_ca_system_score_gemma":0.0001167161,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001626555,"about_ca_topic_score_gemma":0.0002456801,"domain_scores_codex":[0.998019,0.0002367068,0.001080158,0.0003801343,0.00004942696,0.0002345549],"domain_scores_gemma":[0.998127,0.0002244145,0.0008367181,0.0002370048,0.0004389369,0.0001359067],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001264129,0.00006986554,0.0354973,0.00004189559,0.000635734,0.000002944293,0.0000279211,0.000002679303,0.9563591,0.000008767412,0.00005410543,0.006035504],"study_design_scores_gemma":[0.005839764,0.01665446,0.5868164,0.0001319031,0.001655223,0.000380967,0.0004342419,0.000345062,0.3599336,0.0002071887,0.0269224,0.0006787341],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964766,0.001744732,0.001006613,0.0001386303,0.0003302853,0.0001815959,0.0001009195,0.000002639611,0.00001798538],"genre_scores_gemma":[0.9940202,0.002859992,0.002570282,0.000133409,0.0003267918,8.731095e-7,0.00001864961,0.00001548437,0.00005436511],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5964255,"threshold_uncertainty_score":0.6097224,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04873140321835471,"score_gpt":0.3489647585602838,"score_spread":0.3002333553419291,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}