{"id":"W2809551216","doi":"10.1186/s12864-018-4852-1","title":"Transcriptome alteration in Phytophthora infestans in response to phenazine-1-carboxylic acid production by Pseudomonas fluorescens strain LBUM223","year":2018,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Université de Moncton","funders":"Natural Sciences and Engineering Research Council of Canada; New Brunswick Innovation Foundation","keywords":"Phytophthora infestans; Biology; Pseudomonas fluorescens; Transcriptome; Gene; Blight; Microbiology; Genetics; Gene expression; Botany; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118886,0.0003886749,0.0004543558,0.0002212197,0.0001775801,0.0003683882,0.0001352373,0.0002917122,0.0006778458],"category_scores_gemma":[0.0001388389,0.0001324632,0.0003432301,0.0003060928,0.0002186032,0.0001810737,0.0002417638,0.0005499919,0.0002795809],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002402176,"about_ca_system_score_gemma":0.0001849764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008279438,"about_ca_topic_score_gemma":0.0008062127,"domain_scores_codex":[0.9998164,0.00001578613,0.00001080772,0.00005610001,0.00006305629,0.00003792276],"domain_scores_gemma":[0.9998842,0.00002725487,0.00003567914,0.000008885383,0.00002088636,0.00002315779],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006110778,0.00001387872,0.000211524,0.00003206272,0.000002073682,0.00002984737,0.00001442799,0.00001902454,0.9992144,0.000007644822,0.00002089926,0.0003731176],"study_design_scores_gemma":[0.00001668658,0.0006158521,0.07911709,0.0000239864,0.00004651913,0.0004365384,0.0002441278,0.001914615,0.9147019,0.00007816281,0.002779037,0.00002540871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937117,0.0009074492,0.001628444,0.0001329008,0.00003170004,0.00003115823,0.00263802,0.0000961204,0.0008224644],"genre_scores_gemma":[0.9899195,0.0007493587,0.002431846,0.0001567303,0.00001835611,0.00009965185,0.004115784,0.00004073615,0.002467922],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008279438,"threshold_uncertainty_score":0.002267659,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02574399689522975,"score_gpt":0.2482356717079164,"score_spread":0.2224916748126866,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}