{"id":"W2809610054","doi":"10.1111/tpj.14004","title":"Comprehensive cross‐genome survey and phylogeny of glycoside hydrolase family 16 members reveals the evolutionary origin of <scp>EG</scp>16 and <scp>XTH</scp> proteins in plant lineages","year":2018,"lang":"en","type":"article","venue":"The Plant Journal","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":60,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Xyloglucan; Biology; Phylogenetics; Phylogenetic tree; Lineage (genetic); Glycoside hydrolase; Gene family; Gene; Genome; Cell wall; Genetics; Evolutionary biology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003076225,0.0003871482,0.0005509544,0.002196199,0.0004206197,0.0005382746,0.0002267736,0.0003304456,0.001757115],"category_scores_gemma":[0.0004658294,0.0001817119,0.0006047174,0.004420585,0.0002231147,0.0004281227,0.0007350199,0.0004806467,0.001025935],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003156123,"about_ca_system_score_gemma":0.0005742402,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002295871,"about_ca_topic_score_gemma":0.004452548,"domain_scores_codex":[0.9997469,0.00002185688,0.00002464951,0.000110512,0.00005544506,0.00004071418],"domain_scores_gemma":[0.99959,0.00006535333,0.0001696223,0.00004408048,0.00005154533,0.00007938975],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001214121,0.0001075405,0.2429834,0.002273976,0.0006490493,0.001217803,0.001341823,0.001370421,0.643126,0.000813116,0.003092807,0.1018099],"study_design_scores_gemma":[0.00001928303,0.0001480659,0.9522584,0.000123661,0.0002922156,0.001090206,0.0004650033,0.001012189,0.009343967,0.0003057907,0.03491668,0.00002457774],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9532921,0.005497233,0.002106879,0.00007093763,0.000009754105,0.00003333393,0.03702115,0.0001587135,0.001809889],"genre_scores_gemma":[0.8285245,0.007004882,0.01248428,0.0001177997,0.00001771321,0.0001117526,0.1482635,0.0001104391,0.00336521],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002295871,"threshold_uncertainty_score":0.00587815,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03915098067061117,"score_gpt":0.2391435758675403,"score_spread":0.1999925951969291,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}