{"id":"W2810173212","doi":"10.1128/msystems.00007-18","title":"Asymptomatic Intestinal Colonization with Protist<i>Blastocystis</i>Is Strongly Associated with Distinct Microbiome Ecological Patterns","year":2018,"lang":"en","type":"article","venue":"mSystems","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Victoria; University of Calgary; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Universidad Nacional Autónoma de México; Government of Canada; Consejo Nacional de Ciencia y Tecnología; Human Frontier Science Program; Instituto Mexicano del Seguro Social; University of Alberta","keywords":"Blastocystis; Biology; Microbiome; Colonization; Population; Protist; Feces; Microbiology; Zoology; Ecology; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002421405,0.0002075326,0.0004563514,0.0004763764,0.0003764412,0.000596609,0.0001626149,0.0003648251,0.002061997],"category_scores_gemma":[0.001283879,0.0001460517,0.0001998514,0.0003673816,0.0004957542,0.0003275868,0.000427301,0.000492359,0.0002204043],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002203909,"about_ca_system_score_gemma":0.0003468263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002416128,"about_ca_topic_score_gemma":0.003377343,"domain_scores_codex":[0.9995759,0.00007276813,0.00002883399,0.0001410289,0.00006907153,0.0001123731],"domain_scores_gemma":[0.9985331,0.0001593531,0.0007726952,0.00008643173,0.00009964003,0.0003488328],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001118358,0.00008497247,0.9205188,0.00007277653,0.00006539455,0.0007674417,0.0002018238,0.00003471045,0.07132473,0.0001036196,0.0002053353,0.005502],"study_design_scores_gemma":[0.000002208327,0.0001587227,0.9974959,0.000005231815,0.00001180995,0.0006809385,0.0001595344,0.0000820085,0.001185762,0.00004240076,0.0001714135,0.00000392007],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987094,0.0002445304,0.0002607972,0.00006564034,0.000006656642,0.000004716981,0.0001156139,0.00001174456,0.0005807422],"genre_scores_gemma":[0.9994142,0.00006724046,0.0001705323,0.00003102004,0.000007707417,0.000002612208,0.0001217826,0.000003123346,0.0001817353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002416128,"threshold_uncertainty_score":0.006898046,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00867522446195213,"score_gpt":0.2250866643463709,"score_spread":0.2164114398844188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}