{"id":"W2811460763","doi":"10.1016/j.diagmicrobio.2018.06.016","title":"Incubation time and culture media impact success of identification of Nocardia spp. by MALDI-ToF mass spectrometry","year":2018,"lang":"en","type":"article","venue":"Diagnostic Microbiology and Infectious Disease","topic":"Actinomycetales infections and treatment","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"ca_institutions":"Public Health Ontario","funders":"","keywords":"Agar; Matrix-assisted laser desorption/ionization; Nocardia; Mass spectrometry; Microbiology; Incubation; Chromatography; Agar plate; Incubation period; Biology; Formic acid; Bacteria; Chemistry; Biochemistry; Desorption","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002827767,0.0008121716,0.0007725699,0.0009305642,0.0005957193,0.002180451,0.0005705631,0.0009031257,0.003986795],"category_scores_gemma":[0.009662355,0.0004861901,0.0003973305,0.0008716463,0.0004933089,0.001580106,0.001047984,0.0006347386,0.001650347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003771551,"about_ca_system_score_gemma":0.0007548929,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002388134,"about_ca_topic_score_gemma":0.003871437,"domain_scores_codex":[0.9968436,0.0009192933,0.0004707177,0.0005815947,0.0008077547,0.0003771105],"domain_scores_gemma":[0.9904706,0.006111543,0.001081434,0.0003360048,0.001570964,0.0004293392],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003263359,0.0004045598,0.02977378,0.0006079206,0.00009625088,0.0002977163,0.0002798221,0.0003864201,0.9394811,0.00007884199,0.0007537018,0.0245766],"study_design_scores_gemma":[0.00002841894,0.001898224,0.07418393,0.0001503107,0.0002719891,0.0006477001,0.0007464722,0.00178345,0.9135291,0.0001768615,0.006508248,0.00007526217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9815629,0.00823452,0.00273401,0.0006239665,0.0003106957,0.0001301754,0.001182519,0.000167,0.005054329],"genre_scores_gemma":[0.9734095,0.006330466,0.01211785,0.0004241546,0.0001115763,0.0001377297,0.002358841,0.000195135,0.004914662],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003986795,"threshold_uncertainty_score":0.01495481,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003040336383582803,"score_gpt":0.2430291725592622,"score_spread":0.2399888361756794,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}