{"id":"W2858889218","doi":"10.3389/fmicb.2018.01577","title":"Related Endogenous Retrovirus-K Elements Harbor Distinct Protease Active Site Motifs","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; University of Winnipeg","funders":"Natural Sciences and Engineering Research Council of Canada; Compute Canada; Western Canada Research Grid; University of Winnipeg","keywords":"Biology; Proteases; Retrovirus; Endogenous retrovirus; Protease; Reverse transcriptase; Virology; Provirus; Genetics; Gene; Genome; RNA; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001661889,0.0002955855,0.0002198458,0.0003553753,0.0002150062,0.0004092851,0.000346279,0.0003894275,0.002355347],"category_scores_gemma":[0.0002937238,0.0001056255,0.0003301062,0.0004634813,0.0003682072,0.0003059886,0.0003165404,0.0005458141,0.0006328962],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003876411,"about_ca_system_score_gemma":0.0002839004,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003390263,"about_ca_topic_score_gemma":0.0004345851,"domain_scores_codex":[0.9998174,0.0000220197,0.00002706414,0.00006663103,0.00002897848,0.00003793622],"domain_scores_gemma":[0.9996421,0.00007730987,0.0001516639,0.00004859495,0.00003429048,0.00004593906],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004802814,0.0000725233,0.01052085,0.0001520214,0.00002789582,0.0004956714,0.0001242896,0.0001532764,0.9786975,0.001131767,0.00005668924,0.008087274],"study_design_scores_gemma":[0.00008208558,0.001075411,0.08816706,0.00005586923,0.000167103,0.01355372,0.0004302181,0.001484653,0.8786784,0.001278204,0.01499039,0.00003690408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.990217,0.00168589,0.005448983,0.00004002238,0.00001857159,0.00004660328,0.0006639982,0.00005933721,0.001819636],"genre_scores_gemma":[0.9928844,0.0003414733,0.004799308,0.00004734435,0.00001028098,0.00002170147,0.000931802,0.00002026495,0.0009433102],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002355347,"threshold_uncertainty_score":0.007879376,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01171809553510264,"score_gpt":0.1988372890757274,"score_spread":0.1871191935406247,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}