{"id":"W2866889209","doi":"10.21769/bioprotoc.2915","title":"Mouse Mammary Gland Whole Mount Preparation and Analysis","year":2018,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University; Victoria Hospital; London Health Sciences Centre","funders":"","keywords":"Mammary gland; Adipose tissue; Epithelium; Fat pad; Myoepithelial cell; Stroma","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001289646,0.001196106,0.0007572338,0.002943249,0.001226106,0.0007977312,0.001320165,0.001634575,0.02249086],"category_scores_gemma":[0.000437638,0.0009393726,0.001143065,0.0009208263,0.0006633145,0.0006553403,0.0006644191,0.002973773,0.01065151],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007798297,"about_ca_system_score_gemma":0.0007458943,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001600848,"about_ca_topic_score_gemma":0.005067874,"domain_scores_codex":[0.9989796,0.0000950041,0.0001046139,0.0003004655,0.0003546653,0.0001656537],"domain_scores_gemma":[0.999332,0.00008132293,0.00009572045,0.00017186,0.0001873411,0.0001317664],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003487451,0.0001795545,0.0003914052,0.000435399,0.00003809767,0.0002689608,0.0001212017,0.0003183841,0.978807,0.002726576,0.005901165,0.01046333],"study_design_scores_gemma":[0.0001971444,0.0008382229,0.006976239,0.0002716811,0.0001606562,0.001679142,0.0001215153,0.003647453,0.7811335,0.00181483,0.2030813,0.00007837607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2120616,0.01540696,0.5377595,0.002539372,0.00322956,0.00703095,0.1227403,0.02195834,0.07727347],"genre_scores_gemma":[0.2399966,0.01431705,0.4093753,0.001973667,0.0003247226,0.01320843,0.1050004,0.004319236,0.2114846],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.02249086,"threshold_uncertainty_score":0.07523942,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02114938523970749,"score_gpt":0.3432805833683511,"score_spread":0.3221311981286436,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}