{"id":"W2868355673","doi":"10.1101/365205","title":"Analysis of head and neck carcinoma progression reveals novel and relevant stage-specific changes associated with immortalisation and malignancy","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre","funders":"","keywords":"CDKN2A; Head and neck squamous-cell carcinoma; Biology; Cancer research; FHIT; Carcinogenesis; Malignancy; Cancer; Head and neck cancer; Tumor suppressor gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001115027,0.0001040489,0.0001249325,0.0003798829,0.000104224,0.0002331599,0.00008326442,0.0001288387,0.001052473],"category_scores_gemma":[0.0001300525,0.00007380259,0.0001741096,0.0002537411,0.0001050535,0.00008563411,0.000134308,0.0001535182,0.0002311165],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001711116,"about_ca_system_score_gemma":0.0001241216,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001200824,"about_ca_topic_score_gemma":0.001510137,"domain_scores_codex":[0.999945,0.000004956678,0.000003668174,0.00001451591,0.0000183042,0.00001342242],"domain_scores_gemma":[0.9999087,0.00001619955,0.00003049985,0.00001258208,0.00001833456,0.00001364386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002062676,0.00001673227,0.01907203,0.00002419541,0.00001112654,0.00007758127,0.00003093811,0.0000709678,0.9773004,0.00003552106,0.00005190174,0.003102306],"study_design_scores_gemma":[0.000005082192,0.0003285418,0.6762261,0.000004970702,0.00003875876,0.001012367,0.00009759242,0.0008787093,0.3189518,0.00007150535,0.002376863,0.000007630671],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972793,0.0006572301,0.0007876772,0.00001145632,0.000003360006,0.00001095704,0.0007087594,0.00003084375,0.0005105392],"genre_scores_gemma":[0.9967712,0.000332898,0.0006273867,0.00001118282,0.000002713854,0.00001878462,0.001197195,0.000006085853,0.001032611],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001200824,"threshold_uncertainty_score":0.003520846,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02050539202734633,"score_gpt":0.2481593335388468,"score_spread":0.2276539415115005,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}