{"id":"W2883402367","doi":"10.1111/jeu.12672","title":"Transcriptome Profiling of <i>Bigelowiella natans</i> in Response to Light Stress","year":2018,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada; Joint Genome Institute; U.S. Department of Energy","keywords":"Biology; Transcriptome; Profiling (computer programming); Fight-or-flight response; Computational biology; Evolutionary biology; Genetics; Gene; Gene expression; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007368368,0.0001456792,0.0003331974,0.0001909712,0.00002541448,0.000005861194,0.0003739538,0.000181814,0.00003286644],"category_scores_gemma":[0.0002346732,0.000121761,0.0001147101,0.0001702343,0.00008698578,0.000005037331,0.00006646751,0.0001342197,0.000005189403],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002049216,"about_ca_system_score_gemma":0.0002218572,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000004420338,"about_ca_topic_score_gemma":0.00002915921,"domain_scores_codex":[0.9987242,0.0001478938,0.0005784639,0.0002085492,0.00006282602,0.0002780904],"domain_scores_gemma":[0.999141,0.00003090999,0.0002442114,0.0002150847,0.0002734569,0.00009538423],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002302456,0.0001156137,0.0003855233,0.00002849615,0.00004077593,0.00002054147,0.0002315523,0.00001345132,0.996505,0.00004922242,0.0001705565,0.0001368086],"study_design_scores_gemma":[0.0007765069,0.002217023,0.0001370662,0.0001183445,0.00001912167,0.0003745938,0.0001889807,0.000002081961,0.9884289,0.00008955993,0.00752191,0.0001258949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958459,0.0004465371,0.002381155,0.0004522748,0.0004946931,0.0001393755,0.00004401309,0.000002184919,0.0001938822],"genre_scores_gemma":[0.997035,0.00008104644,0.002168305,0.0004001695,0.0001822545,0.00000219535,0.000006577292,0.00001642898,0.0001080656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008076086,"threshold_uncertainty_score":0.496527,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006519094329822417,"score_gpt":0.2414383661113668,"score_spread":0.2349192717815443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}