{"id":"W2883706068","doi":"10.1038/protex.2015.048","title":"BAC ends library generation for Illumina sequencing","year":2015,"lang":"en","type":"article","venue":"Protocol Exchange","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"L'Alliance Boviteq","funders":"Agence Nationale de la Recherche","keywords":"Illumina dye sequencing; Computational biology; DNA sequencing; Biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002512102,0.002388099,0.002472254,0.00327452,0.001950287,0.001799092,0.002346433,0.00158939,0.04271347],"category_scores_gemma":[0.003291714,0.001851824,0.002515104,0.003079667,0.0006063042,0.0007089201,0.002151916,0.004231051,0.05341296],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007641413,"about_ca_system_score_gemma":0.001457575,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001670178,"about_ca_topic_score_gemma":0.005099903,"domain_scores_codex":[0.9968658,0.0005529332,0.0003401469,0.0009880288,0.0008312915,0.0004218312],"domain_scores_gemma":[0.9984279,0.0002061006,0.00008121991,0.0004802354,0.00060924,0.000195349],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001194379,0.000361635,0.0009856713,0.001839145,0.0002341543,0.0007625842,0.0005896403,0.003096175,0.7855105,0.009821029,0.07900895,0.1165961],"study_design_scores_gemma":[0.0003852307,0.0005231887,0.003994667,0.0002486168,0.0002132554,0.00059791,0.00008883302,0.01233516,0.3404711,0.006823517,0.6340793,0.0002391965],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"protocol","genre_scores_codex":[0.0203131,0.002116106,0.8106731,0.0003739994,0.001068947,0.007668475,0.08248305,0.02904885,0.04625442],"genre_scores_gemma":[0.01957193,0.001368372,0.7526361,0.000803452,0.0001777756,0.008945771,0.1781965,0.0068311,0.03146903],"genre_candidate":"protocol","genre_consensus":null,"teacher_disagreement_score":0.04271347,"threshold_uncertainty_score":0.1428908,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08854422327749964,"score_gpt":0.3041260450242523,"score_spread":0.2155818217467526,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}