{"id":"W2884074669","doi":"10.1111/jeu.12669","title":"What Can Environmental Sequences Tell Us About the Distribution of Low‐Rank Taxa? The Case of <i>Euplotes</i> (Ciliophora, Spirotrichea), Including a Description of <i>Euplotes enigma</i> sp. nov.","year":2018,"lang":"en","type":"article","venue":"Journal of Eukaryotic Microbiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Taxon; Systematics; Evolutionary biology; Monophyly; Ecology; Genus; Biogeography; Phylogenetics; Zoology; Clade; Taxonomy (biology); Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001798975,0.0006473619,0.0007816572,0.003678086,0.0009078295,0.002714155,0.0005490714,0.0009606713,0.00193741],"category_scores_gemma":[0.007897912,0.0003661552,0.0004008072,0.00414827,0.001385349,0.004528498,0.001325091,0.001165614,0.002023224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004187123,"about_ca_system_score_gemma":0.0005469103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001999124,"about_ca_topic_score_gemma":0.005063677,"domain_scores_codex":[0.9989825,0.0003231527,0.0001482648,0.0003273613,0.0001260802,0.00009262402],"domain_scores_gemma":[0.9949794,0.002063305,0.001187989,0.0005758139,0.0008659683,0.0003274237],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006578307,0.00006813452,0.453516,0.005460642,0.0006625964,0.004195429,0.008980871,0.002780901,0.07888718,0.007988888,0.00892268,0.4278788],"study_design_scores_gemma":[0.00001816572,0.0002640312,0.6031434,0.002844318,0.0006025853,0.004654023,0.01077164,0.005253177,0.01581522,0.03102961,0.3253592,0.0002445814],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7839848,0.1119509,0.05309381,0.009490477,0.001074877,0.00005630396,0.01857211,0.0006845617,0.02109222],"genre_scores_gemma":[0.8796378,0.03633177,0.05882727,0.003175116,0.001019942,0.00004948958,0.01785034,0.0004891952,0.002618994],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003678086,"threshold_uncertainty_score":0.009513974,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01610248523005754,"score_gpt":0.2281935029572907,"score_spread":0.2120910177272331,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}