{"id":"W2885211638","doi":"10.1139/gen-2018-0046","title":"Genome-wide survey, characterization, and expression analysis of RING finger protein genes in <i>Brassica oleracea</i> and their syntenic comparison to <i>Brassica rapa</i> and <i>Arabidopsis thaliana</i>","year":2018,"lang":"en","type":"article","venue":"Genome","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Synteny; Brassica rapa; Gene; Genetics; Brassica oleracea; Arabidopsis thaliana; Genome; Tandem exon duplication; Gene duplication; Arabidopsis; Gene family; Protein domain; Botany; Mutant","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002162787,0.000251313,0.0003104607,0.001049057,0.0003345508,0.0002928218,0.0002029177,0.0002379411,0.0005009928],"category_scores_gemma":[0.0001880271,0.0001133689,0.0004823437,0.001220642,0.0001405704,0.0001222508,0.0002160493,0.0002300974,0.0002550801],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002704794,"about_ca_system_score_gemma":0.00021473,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004278755,"about_ca_topic_score_gemma":0.008224277,"domain_scores_codex":[0.9998217,0.00001312985,0.00001377438,0.00008750673,0.0000340962,0.00002975904],"domain_scores_gemma":[0.9997724,0.00003342072,0.00008064052,0.00002643994,0.00003563163,0.00005146283],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002775412,0.00002819938,0.06981371,0.0002198365,0.000150213,0.0005188769,0.0002283197,0.0002160601,0.9198692,0.00008140491,0.0002762191,0.008320403],"study_design_scores_gemma":[0.00001700167,0.00008167543,0.9698136,0.00001526776,0.0001783151,0.0009764084,0.0002356922,0.0005960133,0.02240739,0.00006088299,0.005602576,0.00001517719],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9937627,0.00136345,0.0006346114,0.00003984807,0.000004590866,0.000007837709,0.003746869,0.00005082093,0.0003893098],"genre_scores_gemma":[0.9863043,0.000835372,0.001339371,0.00005934562,0.000009799365,0.00001874626,0.01051576,0.00002422941,0.0008931534],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004278755,"threshold_uncertainty_score":0.008507669,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0157314020707475,"score_gpt":0.2384329560415716,"score_spread":0.2227015539708241,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}