{"id":"W2885783422","doi":"10.1139/cjfr-2018-0135","title":"Genome-wide systematic characterization and its regulatory expression reprogramming process of the bZIP transcription factors during trauma response in <i>Camellia sinensis</i>","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Forest Research","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Nanhu Scholars Program for Young Scholars of Xinyang Normal University; Xinyang Normal University; National Natural Science Foundation of China; National Science Foundation","keywords":"Biology; Leucine zipper; Arabidopsis; Gene; Genetics; bZIP domain; Camellia sinensis; Transcription factor; Genome; Abiotic stress; Phylogenetic tree; Gene expression profiling; Computational biology; Gene expression; Botany; Mutant","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001977369,0.0001999151,0.0003036481,0.0005224546,0.0002167004,0.0002372045,0.0001649581,0.0001903743,0.000470162],"category_scores_gemma":[0.0001157596,0.0001238567,0.0003799548,0.0004588589,0.0001557609,0.000187856,0.0002543773,0.0002793672,0.0002158656],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002241636,"about_ca_system_score_gemma":0.0001604393,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009771093,"about_ca_topic_score_gemma":0.001266936,"domain_scores_codex":[0.9998468,0.000009835286,0.00001297423,0.00007510892,0.00003217745,0.00002308458],"domain_scores_gemma":[0.9998667,0.00001857527,0.00004941538,0.00001426032,0.00002316282,0.00002782034],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008812662,0.000009375068,0.005763812,0.0000601411,0.00001471042,0.00006054654,0.00009640732,0.00003255573,0.991237,0.0000538585,0.00006456132,0.002518872],"study_design_scores_gemma":[0.00003309293,0.0002015402,0.8492143,0.00002121448,0.000133013,0.0006948466,0.0002254998,0.001496191,0.1401124,0.0001374969,0.007704844,0.00002562909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9935081,0.001330405,0.001607542,0.00005464056,0.00001089935,0.00002537494,0.002722322,0.00004852432,0.0006922019],"genre_scores_gemma":[0.9891234,0.0005957825,0.001832475,0.0001303964,0.00001547398,0.00005812227,0.006913651,0.00002859884,0.001302056],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009771093,"threshold_uncertainty_score":0.001942813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0212368768501911,"score_gpt":0.2743194283636761,"score_spread":0.253082551513485,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}