{"id":"W2886466753","doi":"10.1093/nar/gky735","title":"i-Motif DNA: structural features and significance to cell biology","year":2018,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":425,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Motif (music); Structural motif; DNA; Nucleic acid; Computational biology; Cytosine; Sequence motif; Base pair; Nucleic acid structure; Genetics; RNA; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003732465,0.000185035,0.0001623537,0.00007882631,0.0003049628,0.00006494508,0.0004874729,0.0002910773,0.0001829805],"category_scores_gemma":[0.0001957969,0.0001642755,0.00004690252,0.0002250096,0.0007439022,0.000005307293,0.0005494619,0.0002862001,0.0001135761],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002518684,"about_ca_system_score_gemma":0.00008274895,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003590809,"about_ca_topic_score_gemma":0.00001877122,"domain_scores_codex":[0.9981766,0.000104734,0.0001605672,0.0006671727,0.0002426038,0.0006482821],"domain_scores_gemma":[0.9988219,0.0000295591,0.00003051753,0.0005530256,0.0002754194,0.0002895752],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001374411,0.00001687283,0.002423917,0.00002158136,0.0000159854,0.000003317011,0.0001262647,3.665323e-7,0.9729798,0.0001139545,0.01907746,0.005082994],"study_design_scores_gemma":[0.000347151,0.000680827,0.006791735,0.00000815303,0.000003317543,0.0000183565,0.0002108952,0.0000156849,0.8861727,0.000303074,0.1052378,0.0002102538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9786335,0.000388138,0.00004889647,0.0004674596,0.0001328915,0.0002029371,0.00003041881,0.00002174321,0.02007407],"genre_scores_gemma":[0.9924837,0.00007023402,0.001173155,0.0003059075,0.0009048699,0.00002037047,0.00003756138,0.00003628166,0.004967877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08680713,"threshold_uncertainty_score":0.6698959,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01914768532516117,"score_gpt":0.3280566684918777,"score_spread":0.3089089831667166,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}