{"id":"W2887351902","doi":"10.1002/cjp2.112","title":"Breast cancer biomarkers in clinical testing: analysis of a UK national external quality assessment scheme for immunocytochemistry and in situ hybridisation database containing results from 199 300 patients","year":2018,"lang":"en","type":"article","venue":"The Journal of Pathology Clinical Research","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Medicine; Breast cancer; Oncology; Internal medicine; Cancer; Biomarker; Ductal carcinoma; Progesterone receptor; Gynecology; Estrogen receptor; Biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01262706,0.0005780229,0.001848923,0.006394762,0.0005229244,0.002490737,0.001336883,0.0009413473,0.001934164],"category_scores_gemma":[0.04387078,0.000581413,0.0008191133,0.01196306,0.0006686781,0.0007009305,0.002665062,0.0006368033,0.001299327],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002728447,"about_ca_system_score_gemma":0.004024804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02684849,"about_ca_topic_score_gemma":0.01972993,"domain_scores_codex":[0.9764114,0.005686925,0.006684078,0.004082358,0.006002773,0.001132499],"domain_scores_gemma":[0.9291624,0.02057791,0.02583564,0.009454821,0.01280752,0.002161718],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009611218,0.00009590713,0.9644868,0.00101951,0.0003965003,0.0006389222,0.0006139149,0.0008411508,0.001548438,0.000246436,0.009676196,0.019475],"study_design_scores_gemma":[0.0001562282,0.0001698348,0.9803065,0.000216701,0.0001741376,0.001038382,0.0002949231,0.001651451,0.0008951215,0.0000965922,0.01495661,0.00004346318],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.714034,0.003110691,0.00516587,0.000453455,0.00006110455,0.001353059,0.2727171,0.0002549345,0.002849783],"genre_scores_gemma":[0.6295276,0.0008604747,0.007715504,0.0003895218,0.00004430081,0.001934561,0.3586296,0.00008239137,0.0008160294],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02684849,"threshold_uncertainty_score":0.06677908,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.4502120533375113,"score_gpt":0.618210457192407,"score_spread":0.1679984038548957,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}