{"id":"W2887380957","doi":"10.1038/s41467-018-05471-3","title":"Structural basis of cell wall anchoring by SLH domains in Paenibacillus alvei","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Zymeworks (Canada); University of Victoria","funders":"Austrian Science Fund; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Peptidoglycan; Cell envelope; Trimer; Cell wall; Paenibacillus; S-layer; Structural similarity; Biology; Protein structure; Protein domain; Peptide sequence; Cell division; Bacteria; Chemistry; Biochemistry; Cell; Genetics; Escherichia coli; Gene; Dimer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005897671,0.0001270381,0.00009789037,0.00009984754,0.000136753,0.0001597869,0.0001753059,0.0001611761,0.0003109507],"category_scores_gemma":[0.0001201178,0.00009290846,0.0001327964,0.00008562276,0.0002125134,0.0001243629,0.0001756462,0.0002039132,0.0001119712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001303284,"about_ca_system_score_gemma":0.0001269095,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008213984,"about_ca_topic_score_gemma":0.0007530521,"domain_scores_codex":[0.9999632,0.00000699415,0.000003062461,0.000007166037,0.00001038284,0.000009186749],"domain_scores_gemma":[0.9999285,0.00001176133,0.00002659652,0.000006669193,0.000006611288,0.00001992434],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000953258,0.00002549892,0.001743006,0.00003153892,0.00000591873,0.00017262,0.00003831109,0.0003145336,0.9964579,0.0002214587,0.00002255613,0.0008713866],"study_design_scores_gemma":[0.00004390661,0.0004434034,0.05502907,0.00001338103,0.00002966238,0.0006893905,0.0002742198,0.009995576,0.9310964,0.0005527003,0.001812596,0.00001964288],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993981,0.00009164172,0.0003003673,0.00001396212,0.000001540054,0.000002414203,0.00001674742,0.000007176537,0.0001679485],"genre_scores_gemma":[0.999361,0.0000531,0.0003931447,0.00001024272,9.726875e-7,0.000002496883,0.00005722461,0.000001994109,0.0001199649],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008213984,"threshold_uncertainty_score":0.001633286,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01003387896735948,"score_gpt":0.2647740419645581,"score_spread":0.2547401629971986,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}