{"id":"W2887787029","doi":"10.1093/jac/dky303","title":"Genomic characterization of IMP and VIM carbapenemase-encoding transferable plasmids of Enterobacteriaceae","year":2018,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Calgary Laboratory Services","keywords":"Plasmid; Klebsiella pneumoniae; Enterobacteriaceae; Biology; Replicon; Microbiology; Transformation (genetics); Genetics; Gene; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001585279,0.0003235493,0.0002456921,0.0007306747,0.0001514693,0.0003632776,0.0002146052,0.0002481149,0.0007268033],"category_scores_gemma":[0.0007875016,0.0001117016,0.000321084,0.0007556076,0.000184089,0.0001634491,0.0002997052,0.0003432233,0.0004273778],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002062189,"about_ca_system_score_gemma":0.0002605104,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001323817,"about_ca_topic_score_gemma":0.001026179,"domain_scores_codex":[0.9997533,0.00002239152,0.00002634334,0.00008395642,0.00006618484,0.00004790541],"domain_scores_gemma":[0.9995159,0.00008549229,0.0001686917,0.00005889325,0.0001091795,0.00006185866],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002400401,0.00009901279,0.06472516,0.0001888978,0.00004844444,0.0002512787,0.000392648,0.0002257643,0.9220677,0.00006463606,0.00007186612,0.01162448],"study_design_scores_gemma":[0.00003866255,0.0007478649,0.8082691,0.00006152751,0.0001454844,0.003631005,0.0007783613,0.001286096,0.1797972,0.00008859759,0.005138878,0.00001714993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995748,0.0002688091,0.001930375,0.00002897567,0.000002503964,0.00004006415,0.001575466,0.00002322953,0.0003825721],"genre_scores_gemma":[0.9864123,0.0003047966,0.005042314,0.00004442975,0.000008433074,0.00005822346,0.007376325,0.00002253208,0.0007306233],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001323817,"threshold_uncertainty_score":0.002632201,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005943343041720253,"score_gpt":0.2250987351225407,"score_spread":0.2191553920808204,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}