{"id":"W2888423719","doi":"10.1073/pnas.1806573115","title":"Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa","year":2018,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Child Nutrition and Water Access","field":"Nursing","cited_by":192,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Government of Canada; Institut Pasteur; Canadian Institute for Advanced Research; Nutricia Research Foundation; Howard Hughes Medical Institute","keywords":"Pathophysiology; Biology; Gastrointestinal tract; Feces; Small intestinal bacterial overgrowth; Medicine; Internal medicine; Microbiology; Endocrinology; Irritable bowel syndrome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002050517,0.0004484915,0.0003224135,0.001027298,0.0004049118,0.0005738947,0.0001593677,0.0002219023,0.001912326],"category_scores_gemma":[0.0006842571,0.000169335,0.0002841587,0.001044031,0.00062962,0.0002956046,0.0007706621,0.0004861122,0.000282987],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002545978,"about_ca_system_score_gemma":0.0004192708,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003665763,"about_ca_topic_score_gemma":0.004622053,"domain_scores_codex":[0.9996887,0.00004072805,0.00002752803,0.00007751768,0.0000864355,0.00007905171],"domain_scores_gemma":[0.9992757,0.00006877011,0.0004531643,0.00002593247,0.00006824613,0.0001081457],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000435376,0.00006209757,0.8716511,0.0004883519,0.0001061041,0.00353521,0.0006496481,0.00009535026,0.08621106,0.0002662995,0.0006305791,0.03586886],"study_design_scores_gemma":[0.000001300951,0.0001125781,0.9872858,0.00007436874,0.0000340609,0.004333417,0.0005491145,0.00007521911,0.005662002,0.00008513539,0.001780406,0.000006653994],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9854128,0.01022623,0.001085023,0.0001684982,0.00004612677,0.00001658168,0.0008004081,0.0000397795,0.002204615],"genre_scores_gemma":[0.9907578,0.006238579,0.001652276,0.00006836218,0.00002735605,0.00001137209,0.0006195874,0.00001532873,0.0006091889],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003665763,"threshold_uncertainty_score":0.007288873,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02228831183031075,"score_gpt":0.2830417508577206,"score_spread":0.2607534390274098,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}