{"id":"W2888620009","doi":"10.1007/s00425-018-2981-z","title":"Sanger and next generation sequencing in the characterisation of arbuscular mycorrhizal fungi (AMF) in Pancratium maritimum L. (Amaryllidaceae), a representative plant species of Mediterranean sand dunes","year":2018,"lang":"en","type":"article","venue":"Planta","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"Western University","funders":"National Eye Institute; Nando and Elsa Peretti Foundation; Università degli Studi di Palermo; Università degli Studi di Napoli Federico II","keywords":"Sanger sequencing; Biology; DNA sequencing; Botany; Glomeromycota; Glomus; Arbuscular mycorrhizal fungi; Amaryllidaceae; Illumina dye sequencing; Ribosomal DNA; Ribosomal RNA; Colonization; Symbiosis; Ecology; Mycorrhiza; Phylogenetics; Gene; Genetics; Horticulture; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003410243,0.0006744643,0.0007814394,0.001636788,0.0007331148,0.001108681,0.0006169054,0.001146834,0.001572739],"category_scores_gemma":[0.002984568,0.000620425,0.001056128,0.0008634033,0.0004945966,0.000553845,0.000836588,0.001092422,0.001358285],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004916909,"about_ca_system_score_gemma":0.001115098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003045062,"about_ca_topic_score_gemma":0.01436815,"domain_scores_codex":[0.9979411,0.0005731345,0.0001803181,0.0005540414,0.0005513953,0.0001999583],"domain_scores_gemma":[0.9982733,0.0006814422,0.0003013644,0.0002735058,0.0003221862,0.000148345],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003956644,0.00009900433,0.003912954,0.0002613078,0.0001298718,0.0001646312,0.0007316885,0.0007508046,0.9726543,0.0005635814,0.0006611557,0.01967508],"study_design_scores_gemma":[0.0003956961,0.001576315,0.2043574,0.0003830033,0.001540728,0.002570246,0.001359824,0.03353157,0.6320047,0.001839188,0.1202195,0.0002216967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8578396,0.005186223,0.1088512,0.0007656705,0.0003011093,0.0007922713,0.01869366,0.001272089,0.006298222],"genre_scores_gemma":[0.6836906,0.00217252,0.2641844,0.001643028,0.0001220705,0.001214148,0.03245698,0.0008037234,0.01371248],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003410243,"threshold_uncertainty_score":0.01803535,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06697733526002576,"score_gpt":0.2392414599358697,"score_spread":0.172264124675844,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}