{"id":"W2888766295","doi":"10.1371/journal.pone.0202704","title":"Characterization of a serologically atypical Shigella flexneri Z isolated from diarrheal patients in Bangladesh and a proposed serological scheme for Shigella flexneri","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Global Affairs Canada; Department for International Development; International Centre for Diarrhoeal Disease Research, Bangladesh; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"Shigella flexneri; Serotype; Virulence; Microbiology; Biology; Plasmid; Shigella; Virology; Antiserum; Gene; Genetics; Escherichia coli; Antigen","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001487626,0.0004280834,0.0002153063,0.0006732065,0.0002841325,0.0003601635,0.000195664,0.0003558031,0.0008394463],"category_scores_gemma":[0.0004613707,0.0001710645,0.000251564,0.0006270805,0.0002990521,0.0002373706,0.0002815314,0.0002282384,0.0002226188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002172778,"about_ca_system_score_gemma":0.0002125821,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003594982,"about_ca_topic_score_gemma":0.002904304,"domain_scores_codex":[0.9998042,0.00002215772,0.00004368686,0.00005320574,0.00003428211,0.00004233517],"domain_scores_gemma":[0.9997095,0.00004072105,0.0001014754,0.00001550414,0.00005986172,0.0000729296],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003748614,0.00009100199,0.9044508,0.000161197,0.00003949632,0.005068338,0.0009695253,0.000118523,0.08316714,0.00006101776,0.0001821921,0.005315949],"study_design_scores_gemma":[0.00002433095,0.0005971271,0.971835,0.00004747261,0.00007580439,0.01385752,0.003296359,0.0002746248,0.008289531,0.00005902329,0.001624285,0.00001895833],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992387,0.0001633573,0.0001210994,0.00002712354,0.000004716628,0.00001105634,0.0001654119,0.000001440452,0.0002670159],"genre_scores_gemma":[0.9992914,0.000155944,0.0001671616,0.00002278436,0.000004852643,0.000005549958,0.0002404474,8.818301e-7,0.0001109072],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003594982,"threshold_uncertainty_score":0.007148147,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03116545108753136,"score_gpt":0.2536669647952142,"score_spread":0.2225015137076829,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}