{"id":"W2888800386","doi":"10.1128/aem.01632-18","title":"Antibiotic-Resistant Escherichia coli and Class 1 Integrons in Humans, Domestic Animals, and Wild Primates in Rural Uganda","year":2018,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Morris Animal Foundation","keywords":"Antibiotic resistance; Antibiotics; Escherichia coli; Livestock; Biology; Bacteria; Resistance (ecology); Microbiology; Multiple drug resistance; Biotechnology; Ecology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001132172,0.0002180778,0.000259813,0.00004809214,0.00007015304,0.00002215315,0.0000870927,0.000220332,0.0000154214],"category_scores_gemma":[0.000007442113,0.0002016641,0.00001547687,0.00003860448,0.001048139,0.000004749481,0.000216677,0.0001134724,0.000004967256],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002866728,"about_ca_system_score_gemma":0.0000116229,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004397942,"about_ca_topic_score_gemma":0.0002241892,"domain_scores_codex":[0.9989341,0.00004026547,0.0002427605,0.0004425743,0.00002302766,0.0003172765],"domain_scores_gemma":[0.9996991,0.0000185294,0.00006412494,0.0001579617,0.0000022525,0.00005809796],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001872907,0.00004697928,0.161892,0.00002130577,0.0000135267,0.000004099706,0.00007364433,1.854933e-7,0.8372412,0.0001809686,0.00003634027,0.0003024485],"study_design_scores_gemma":[0.001599483,0.0005082918,0.8726433,0.00004591625,0.00001833661,0.00004571942,0.0009909722,0.000009258129,0.1205119,0.0001330719,0.003111412,0.0003823642],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979568,0.001393327,0.00001202299,0.00005545297,0.00004223515,0.0002347161,0.00005315976,0.000005570011,0.0002467639],"genre_scores_gemma":[0.9977204,0.001309166,0.0005699755,0.0001639162,0.00004462229,0.000004419375,0.0001306412,0.000020427,0.0000364429],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7167294,"threshold_uncertainty_score":0.8223623,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003383124659737981,"score_gpt":0.2008822274392718,"score_spread":0.1974991027795338,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}