{"id":"W2888911213","doi":"10.1097/inf.0000000000002174","title":"Pneumococcal Colonization and the Nasopharyngeal Microbiota of Children in Botswana","year":2018,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Colonization; Streptococcus pneumoniae; Microbiology; Pneumococcal infections; Medicine; Immunology; Biology; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005013907,0.0001190784,0.0002095643,0.0002044664,0.0004186854,0.00003537195,0.00008959772,0.00005517694,0.00006055511],"category_scores_gemma":[0.0002609129,0.000062718,0.0001134859,0.0004844063,0.000407644,0.00006925991,0.00004818818,0.0003874222,0.00001351523],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005545457,"about_ca_system_score_gemma":0.0002821165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000396414,"about_ca_topic_score_gemma":0.00001704413,"domain_scores_codex":[0.9989781,0.0002128262,0.0003296962,0.0001160654,0.00016569,0.0001975801],"domain_scores_gemma":[0.9991632,0.0001377067,0.0001960004,0.0001780707,0.0001641521,0.0001608968],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002932584,0.0001868384,0.9975151,0.00002043419,0.00005982293,0.00001225615,0.0002753498,0.00004443834,0.0008692837,0.0001147293,0.0003968022,0.0002116423],"study_design_scores_gemma":[0.003736803,0.0002393561,0.9930231,0.00001854842,0.0005340869,0.001474534,0.00002133705,0.0002169202,0.00002573525,0.0005201891,0.0001122437,0.0000771572],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9958484,0.0006490268,0.00004723655,0.002232938,0.0003170623,0.0004284386,0.000008738179,0.00001970618,0.0004484302],"genre_scores_gemma":[0.9968414,0.000824982,0.000003140605,0.0005634346,0.001698465,0.000009130727,0.000001814827,0.00001348658,0.00004410372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004492056,"threshold_uncertainty_score":0.3220232,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004946187959232564,"score_gpt":0.2378169248863139,"score_spread":0.2328707369270814,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}