{"id":"W2889025559","doi":"10.33043/ff.3.2.155-170","title":"Organization of the multigene families of African Swine Fever Virus","year":2017,"lang":"en","type":"article","venue":"Fine Focus","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Genome; Gene; Virus; Genetics; Indel; Virology; Phylogenetics; Virus classification; Annotation; Evolutionary biology; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000801964,0.00005276649,0.0001169329,0.000004171518,0.0001514776,0.000006792787,0.0003181405,0.00003006304,0.0003663587],"category_scores_gemma":[0.0003355049,0.00001595434,0.00004840292,0.00008998976,0.00009975967,0.00004123058,0.0001700343,0.00002398263,0.00001071397],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000003369756,"about_ca_system_score_gemma":0.000002334688,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001557468,"about_ca_topic_score_gemma":0.001024946,"domain_scores_codex":[0.9995956,0.00002906812,0.0001304154,0.00009168762,0.00006753011,0.0000856382],"domain_scores_gemma":[0.9996132,0.0000397789,0.0001824389,0.00008968586,0.00005637286,0.00001850511],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001931038,0.0000791205,0.5418007,0.000009731257,0.00002109319,5.21585e-7,0.00005543963,0.000008073784,0.4257758,0.001339508,0.003083975,0.02780669],"study_design_scores_gemma":[0.00006006434,0.00003943975,0.9798161,0.00000568271,0.00001221827,8.51831e-8,0.00003852977,0.00003058921,0.01624595,0.0002731869,0.003439303,0.00003883027],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961739,0.00004647302,0.000005375842,0.0016085,0.00005464876,0.00007770762,0.00003530723,0.000008939898,0.00198915],"genre_scores_gemma":[0.9993367,0.00002713131,0.00002395408,0.0000333997,0.00006933659,0.000001376586,0.000009401568,4.6543e-7,0.0004982118],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4380154,"threshold_uncertainty_score":0.4011371,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02494026781250441,"score_gpt":0.2291260847141979,"score_spread":0.2041858169016935,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}