{"id":"W2889208110","doi":"10.1186/s12879-018-3337-9","title":"Epidemiological and genomic characterization of community-acquired Clostridium difficile infections","year":2018,"lang":"en","type":"article","venue":"BMC Infectious Diseases","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Atomic Energy (Canada); Calgary Laboratory Services; University of Regina; University of Calgary","funders":"Calgary Laboratory Services; Canadian Institutes of Health Research; Abbott Laboratories","keywords":"Clostridium difficile; Medicine; Metronidazole; Internal medicine; Medical microbiology; Epidemiology; Vancomycin; Irritable bowel syndrome; Ulcerative colitis; Parasitology; Molecular epidemiology; Antibiotics; Gastroenterology; Disease; Microbiology; Genotype; Virology; Biology; Pathology; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003740202,0.0002210841,0.0001698894,0.001184665,0.0003307529,0.0004128322,0.0002875364,0.0003226523,0.001042368],"category_scores_gemma":[0.001524427,0.0001122663,0.0001407059,0.001084707,0.0002730273,0.0002207835,0.0004075047,0.0003241922,0.0001647027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002862105,"about_ca_system_score_gemma":0.0003934107,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004194027,"about_ca_topic_score_gemma":0.004628565,"domain_scores_codex":[0.9996068,0.00008746214,0.00003997498,0.00007977938,0.0001010242,0.00008498807],"domain_scores_gemma":[0.9983399,0.0002264404,0.0007562736,0.00006415617,0.0003662857,0.0002468004],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00007877695,0.00005658274,0.9918657,0.00002774299,0.0000141291,0.0002719642,0.0001623562,0.00007409308,0.004207996,0.00001808945,0.0001250633,0.003097513],"study_design_scores_gemma":[0.000003651006,0.00006253358,0.9980783,0.000007171244,0.000006852972,0.001005036,0.0002671054,0.000116905,0.0002492345,0.00001608805,0.0001852843,0.000001868506],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992626,0.0001377369,0.0001058593,0.00004338295,0.00000207211,0.000007638698,0.0002040777,0.000002593919,0.0002340144],"genre_scores_gemma":[0.9989748,0.0001039298,0.0003370625,0.00003498837,0.00001161572,0.00001115812,0.0004692218,0.000002055779,0.00005514158],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004194027,"threshold_uncertainty_score":0.008339226,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0399895013082211,"score_gpt":0.315260815583453,"score_spread":0.2752713142752319,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}