{"id":"W2889240474","doi":"10.1016/j.euo.2018.08.003","title":"GBX2 Methylation Is a Novel Prognostic Biomarker and Improves Prediction of Biochemical Recurrence Among Patients with Prostate Cancer Negative for Intraductal Carcinoma and Cribriform Architecture","year":2018,"lang":"en","type":"article","venue":"European Urology Oncology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"University Health Network; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Prostate Cancer Canada","keywords":"Methylation; DNA methylation; Prostate cancer; Biochemical recurrence; Oncology; Epigenetics; Medicine; breakpoint cluster region; Cancer research; Cancer; Prostatectomy; Internal medicine; Biology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003852792,0.0003473061,0.0004383551,0.0005488552,0.0003259712,0.0006692306,0.0003436669,0.0004320811,0.001656592],"category_scores_gemma":[0.001076928,0.000213023,0.0002850466,0.0006443501,0.0003057305,0.0004136872,0.0004857562,0.0005073142,0.0002435271],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002704127,"about_ca_system_score_gemma":0.0002577237,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003019104,"about_ca_topic_score_gemma":0.005593815,"domain_scores_codex":[0.9997686,0.00005452483,0.00001760641,0.00006159629,0.00005321024,0.00004455669],"domain_scores_gemma":[0.9996182,0.00007313758,0.0001500163,0.00002914964,0.00004333048,0.00008614099],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005721801,0.00003336973,0.9878814,0.00002201431,0.0001164701,0.00007078932,0.00005039337,0.0001531608,0.003568852,0.00002400936,0.0002156838,0.007291648],"study_design_scores_gemma":[0.00001811444,0.0001602285,0.996289,0.000008425751,0.0001065997,0.0003439152,0.000112242,0.0008740606,0.001356398,0.00009971661,0.0006244973,0.000006812717],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9977803,0.001097638,0.000164482,0.0001676856,0.00001659279,0.000004792789,0.0002343613,0.00001221573,0.0005219502],"genre_scores_gemma":[0.9987075,0.0001995702,0.0001504643,0.0000481284,0.00002199848,0.000003165237,0.0003501709,0.000004181214,0.000514851],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003019104,"threshold_uncertainty_score":0.006003022,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01972987879238296,"score_gpt":0.2883648659586397,"score_spread":0.2686349871662568,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}