{"id":"W2889240474","doi":"10.1016/j.euo.2018.08.003","title":"GBX2 Methylation Is a Novel Prognostic Biomarker and Improves Prediction of Biochemical Recurrence Among Patients with Prostate Cancer Negative for Intraductal Carcinoma and Cribriform Architecture","year":2018,"lang":"en","type":"article","venue":"European Urology Oncology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"ca_institutions":"University Health Network; Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"Prostate Cancer Canada","keywords":"Methylation; DNA methylation; Prostate cancer; Biochemical recurrence; Oncology; Epigenetics; Medicine; breakpoint cluster region; Cancer research; Cancer; Prostatectomy; Internal medicine; Biology; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000179709,0.0001533618,0.0002570935,0.0001267784,0.00008219718,0.000006517215,0.00004507861,0.00009085945,0.000009288558],"category_scores_gemma":[0.0001659092,0.0001047098,0.00002302788,0.0001306025,0.001354265,0.00006269068,0.00006599617,0.0001715147,5.852241e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005215465,"about_ca_system_score_gemma":0.0001315288,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003538552,"about_ca_topic_score_gemma":0.00001642329,"domain_scores_codex":[0.9989377,0.00009433391,0.0002143501,0.0003907266,0.00009936136,0.0002635276],"domain_scores_gemma":[0.9991566,0.0001563209,0.0001481315,0.0001078426,0.0003189251,0.0001121847],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0124693,0.0003591069,0.8589501,0.0002120258,0.0002905055,0.000009942323,0.004813627,2.499514e-7,0.04515367,0.00001198408,0.0004340702,0.07729546],"study_design_scores_gemma":[0.006944345,0.01126496,0.9723117,0.00004177292,0.0002218811,0.00002895301,0.00005541437,0.0004133685,0.007776283,0.00008523064,0.0007674533,0.00008864806],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960585,0.0004479687,0.0002642279,0.001086178,0.0001048311,0.001494861,0.0002522348,0.00001995127,0.0002712122],"genre_scores_gemma":[0.9983459,0.00006941854,0.001046862,0.0001439699,0.0001163205,0.00009206161,0.000106293,0.00002428158,0.00005492471],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1133616,"threshold_uncertainty_score":0.4989846,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01972987879238296,"score_gpt":0.2883648659586397,"score_spread":0.2686349871662568,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}