{"id":"W2889294648","doi":"10.3389/fcimb.2018.00320","title":"The Virulence Effect of CpxRA in Citrobacter rodentium Is Independent of the Auxiliary Proteins NlpE and CpxP","year":2018,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada; McGill University","keywords":"Citrobacter rodentium; Virulence; Regulon; Biology; Microbiology; Enteropathogenic Escherichia coli; Pathogen; Escherichia coli; Gene; Citrobacter; Mutant; Enterobacteriaceae; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004825334,0.0001154583,0.0001948505,0.00006741725,0.00008826067,0.000009363665,0.0001229625,0.0001532536,0.00000458196],"category_scores_gemma":[0.0000942635,0.00007108656,0.00005019426,0.0001084638,0.000773288,0.000006230041,0.0002834164,0.0001337549,5.049561e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001886885,"about_ca_system_score_gemma":0.00002834098,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001459915,"about_ca_topic_score_gemma":0.0002346562,"domain_scores_codex":[0.9989832,0.000314921,0.0002216232,0.0002424985,0.00003921661,0.0001985192],"domain_scores_gemma":[0.9995924,0.00001956804,0.00009934117,0.0002177869,0.00005223993,0.00001872947],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000137187,0.00001750359,0.2952139,0.00003574049,0.00003316427,2.489535e-7,0.00007910736,5.175122e-7,0.7033062,0.000002181884,0.0004541106,0.0007201421],"study_design_scores_gemma":[0.0007183011,0.0005673048,0.08769581,0.0000280412,0.000009582114,0.000008035264,0.00002812296,0.00001978922,0.9056645,0.00004080606,0.005147307,0.00007242463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969943,0.001581465,0.0004205568,0.00008816773,0.0004417412,0.0003938116,0.00001535132,0.000001739062,0.00006293814],"genre_scores_gemma":[0.9983971,0.001288937,0.00006872175,0.00003003724,0.00004763051,0.00002408035,0.000008259991,0.000006808559,0.0001284628],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2075181,"threshold_uncertainty_score":0.2898826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.003235995260999934,"score_gpt":0.2175334328529296,"score_spread":0.2142974375919297,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}