{"id":"W2889612668","doi":"10.1093/femsyr/foy103","title":"C. P. Kurtzman's evolving concepts of species, genus and higher categories","year":2018,"lang":"en","type":"article","venue":"FEMS Yeast Research","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Phylogenetic tree; Taxon; Genus; Evolutionary biology; Phylogenetics; Zoology; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003293372,0.0000934437,0.0001269534,0.00005434778,0.0001946859,0.00002966581,0.0001516282,0.00008764618,0.0003454031],"category_scores_gemma":[0.0001037092,0.00007552301,0.00003114773,0.0001263642,0.0009268749,0.000003535738,0.0003600876,0.0001069998,0.00003522537],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001072661,"about_ca_system_score_gemma":0.00006607137,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001618838,"about_ca_topic_score_gemma":0.00008840356,"domain_scores_codex":[0.9989753,0.00006673656,0.0001231694,0.0002612293,0.000252641,0.0003209002],"domain_scores_gemma":[0.9992008,0.00001821909,0.00003086458,0.0002479012,0.0004283959,0.00007379129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001802629,0.00009014772,0.02720879,0.00009517166,0.0001713778,0.00001012776,0.0008405992,4.614399e-7,0.8146141,0.003855887,0.143122,0.009811069],"study_design_scores_gemma":[0.000432628,0.0005870272,0.1008644,0.00002994144,0.000008372107,0.000009183392,0.0007340219,0.00001170225,0.1421234,0.0001828551,0.754838,0.0001784121],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9182125,0.01043438,0.00005126672,0.0003630935,0.0003276786,0.0002398959,0.00005075579,0.00001104618,0.07030934],"genre_scores_gemma":[0.9778889,0.0004162597,0.0001082867,0.00002041863,0.0008916224,0.00001143932,0.00001757483,0.00001441941,0.02063112],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6724907,"threshold_uncertainty_score":0.3781922,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04451749352158495,"score_gpt":0.3427784290673509,"score_spread":0.2982609355457659,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}