{"id":"W2889813947","doi":"10.1186/s12859-018-2350-8","title":"SuperNoder: a tool to discover over-represented modular structures in networks","year":2018,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"York University; Università degli Studi di Cagliari; National Science Foundation","keywords":"Computer science; Network motif; Disjoint sets; Modular design; Theoretical computer science; Motif (music); Network analysis; Artificial intelligence; Complex network; Data mining; World Wide Web; Mathematics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002065814,0.002448506,0.001201848,0.005431776,0.0009930213,0.002312831,0.002457114,0.001484446,0.01544931],"category_scores_gemma":[0.009938553,0.001608397,0.002270677,0.00284054,0.000822783,0.003411483,0.002530614,0.00179231,0.004409464],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008093586,"about_ca_system_score_gemma":0.001249586,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001786687,"about_ca_topic_score_gemma":0.004424671,"domain_scores_codex":[0.9992275,0.0002118772,0.00007683798,0.0002220041,0.000218799,0.00004299009],"domain_scores_gemma":[0.9957622,0.003204526,0.0002768729,0.000405338,0.0002178245,0.0001333901],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001228231,0.00043228,0.01804098,0.005124867,0.00123849,0.002390922,0.001968856,0.1606228,0.03304406,0.06110762,0.1551339,0.559667],"study_design_scores_gemma":[0.0001896325,0.0001289332,0.002092856,0.0002916299,0.000161623,0.001065446,0.0002396663,0.8276298,0.0130381,0.08696854,0.06810534,0.00008837859],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01191187,0.0005342648,0.8599592,0.0002824027,0.00009822698,0.0002001216,0.00919731,0.115723,0.002093538],"genre_scores_gemma":[0.05751421,0.0006433621,0.9135466,0.0001336712,0.00005336358,0.0005612414,0.01856303,0.006740404,0.002244148],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01544931,"threshold_uncertainty_score":0.05168313,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008945370019507059,"score_gpt":0.2444919388931529,"score_spread":0.2355465688736458,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}