{"id":"W2890391464","doi":"10.1183/13993003.01994-2017","title":"The DNA repair transcriptome in severe COPD","year":2018,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; St. Paul's Hospital; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"National Heart, Lung, and Blood Institute; Fonds de Recherche du Québec - Santé; Biogen; AstraZeneca; Université Laval; Eli Lilly and Company; Pfizer; Pulmonary Fibrosis Foundation; Flight Attendant Medical Research Institute; U.S. Department of Veterans Affairs","keywords":"Transcriptome; COPD; DNA repair; Biology; Gene; DNA damage; Nucleotide excision repair; Genetics; Bioinformatics; DNA; Computational biology; Gene expression; Medicine; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001460552,0.0001207011,0.0003729783,0.0003491178,0.000217871,0.0003462747,0.00007542004,0.0002543697,0.0004767306],"category_scores_gemma":[0.000334938,0.0001198454,0.0002463225,0.0004926553,0.0001542033,0.0001254892,0.0003106277,0.0002786134,0.000140711],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001800927,"about_ca_system_score_gemma":0.0001847113,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008481563,"about_ca_topic_score_gemma":0.001141143,"domain_scores_codex":[0.9998608,0.00002179098,0.000008403774,0.00005187644,0.00003269862,0.00002446182],"domain_scores_gemma":[0.9998837,0.00002507736,0.00003657668,0.0000119658,0.00002242687,0.00002029262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001278232,0.00003424114,0.09285484,0.0002521303,0.000110998,0.0002305117,0.000477935,0.0009395978,0.8882139,0.0001737831,0.0002960422,0.01513788],"study_design_scores_gemma":[0.00001175008,0.0002372656,0.9806325,0.00002569874,0.00006110786,0.0005984132,0.0003773298,0.001485707,0.01467054,0.0004959634,0.00139225,0.00001141321],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975172,0.0008064669,0.0004323999,0.00004788029,0.000003779205,0.000006787703,0.0009480809,0.000008253503,0.0002291513],"genre_scores_gemma":[0.995845,0.0005286469,0.0007301884,0.00007184535,0.000007050705,0.00002199152,0.002340871,0.000006073707,0.0004483548],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008481563,"threshold_uncertainty_score":0.001686454,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0193497851444916,"score_gpt":0.2619791164348586,"score_spread":0.242629331290367,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}