{"id":"W2890576383","doi":"10.3390/v10090493","title":"Identification of Novel Subcellular Localization and Trafficking of HIV-1 Nef Variants from Reference Strains G (F1.93.HH8793) and H (BE.93.VI997)","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; University of Pittsburgh","keywords":"Biology; Colocalization; Golgi apparatus; Subcellular localization; Immunofluorescence; Cell biology; Flow cytometry; Virology; Molecular biology; Genetics; Antibody; Cytoplasm; Endoplasmic reticulum","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001316629,0.0002256918,0.0001824513,0.0002018038,0.0001716432,0.0002718286,0.0002568746,0.0003636644,0.0004060726],"category_scores_gemma":[0.00020821,0.00009413799,0.0002647419,0.0002561751,0.0001488714,0.0001011047,0.0001563615,0.0003620371,0.0002087413],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002446712,"about_ca_system_score_gemma":0.0001067012,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002925843,"about_ca_topic_score_gemma":0.003335743,"domain_scores_codex":[0.9998738,0.00001422967,0.00001396174,0.00003098314,0.00003578498,0.00003132455],"domain_scores_gemma":[0.999878,0.00002380424,0.00003188708,0.00002712868,0.00002104575,0.00001790478],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009189638,0.00002370222,0.002255665,0.00001592461,0.000009186076,0.0001048187,0.00004210213,0.00002873099,0.9960203,0.00005457344,0.00004225466,0.00131094],"study_design_scores_gemma":[0.00003321508,0.000584459,0.1869443,0.00001556398,0.00007188314,0.004174252,0.0003918801,0.002097307,0.8014145,0.000123807,0.004127604,0.00002126597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979972,0.0002168689,0.0009563034,0.00002104668,0.000004318427,0.00001480611,0.0004490445,0.00001023011,0.0003301389],"genre_scores_gemma":[0.9940686,0.0001353262,0.003085691,0.00005879963,0.000003386083,0.00002060757,0.002033623,0.00002484026,0.0005691044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002925843,"threshold_uncertainty_score":0.005817592,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05674182206502976,"score_gpt":0.295726731895486,"score_spread":0.2389849098304562,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}