{"id":"W2891044811","doi":"10.1097/olq.0000000000000745","title":"High Baseline Anal Human Papillomavirus and Abnormal Anal Cytology in a Phase 3 Trial of the Quadrivalent Human Papillomavirus Vaccine in Human Immunodeficiency Virus–Infected Individuals Older Than 26 Years: ACTG 5298","year":2017,"lang":"en","type":"article","venue":"Sexually Transmitted Diseases","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; University of California, San Francisco; University of California, San Diego; National Institutes of Health; York University; National Institute of Dental and Craniofacial Research; Weill Cornell Medical College; Georgia Clinical and Translational Science Alliance; National Center for Advancing Translational Sciences; ACT Government; University of Cincinnati; National Cancer Institute; University of Rochester; Gilead Sciences; GlaxoSmithKline; Massachusetts General Hospital; Rush University; Washington University in St. Louis; Northwestern University","keywords":"Medicine; Anal cancer; Men who have sex with men; Cytology; Genotyping; Papillomaviridae; Internal medicine; Gynecology; Human immunodeficiency virus (HIV); Cancer; Genotype; Cervical cancer; Immunology; Pathology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008500631,0.0004929752,0.001259898,0.0006361483,0.0005615984,0.000117864,0.0008032355,0.0002789439,0.001761105],"category_scores_gemma":[0.0002461668,0.0003891063,0.0002890083,0.0005401159,0.0006283093,0.0002879287,0.0002399911,0.0008107894,0.000004782584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001287553,"about_ca_system_score_gemma":0.0003360955,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007817938,"about_ca_topic_score_gemma":0.007513208,"domain_scores_codex":[0.9953937,0.0005884607,0.001306521,0.000821204,0.00100198,0.000888116],"domain_scores_gemma":[0.9975932,0.0001991448,0.0003902539,0.001253859,0.0001782672,0.0003853169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.02965085,0.01307,0.826359,0.0007272357,0.0004647487,0.000617245,0.001895115,0.00001781016,0.0928804,0.0009925552,0.0001635744,0.03316144],"study_design_scores_gemma":[0.1131135,0.002508534,0.8808758,0.0001671153,0.0003314919,0.00001000257,0.0001613236,0.0000320815,0.001915271,0.0004178589,0.000107114,0.0003598459],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955235,0.001314677,0.00001459513,0.0003816554,0.000137748,0.001762061,0.0005116613,0.00007458269,0.0002795043],"genre_scores_gemma":[0.9987611,0.000206309,0.00001813654,0.0002117823,0.0002604296,0.0001398049,0.0002574399,0.00007108472,0.00007389778],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09096513,"threshold_uncertainty_score":0.9998561,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02695690190910702,"score_gpt":0.3606937296838572,"score_spread":0.3337368277747502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}