{"id":"W2891402235","doi":"10.1038/s41426-018-0156-4","title":"Nonhuman primates across sub-Saharan Africa are infected with the yaws bacterium <i>Treponema pallidum</i> subsp. <i>pertenue</i>","year":2018,"lang":"en","type":"letter","venue":"Emerging Microbes & Infections","topic":"Syphilis Diagnosis and Treatment","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Grantová Agentura České Republiky; Deutsche Forschungsgemeinschaft; Agence Nationale de la Recherche; Deutscher Akademischer Austauschdienst; European Research Council; National Science Foundation","keywords":"Treponema; Syphilis; Biology; Treponematosis; Virology; Geography; Sexually transmitted disease; Human immunodeficiency virus (HIV)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002524937,0.0005466502,0.0004434671,0.000393968,0.002254924,0.00105193,0.0004329118,0.00619429,0.008315936],"category_scores_gemma":[0.002429092,0.0002652068,0.000225185,0.0003723595,0.001094856,0.001212446,0.0007533615,0.004991249,0.005638381],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009418359,"about_ca_system_score_gemma":0.0005804227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004013767,"about_ca_topic_score_gemma":0.00723651,"domain_scores_codex":[0.9997638,0.00007526903,0.00001429603,0.0000479427,0.00004887528,0.00004981341],"domain_scores_gemma":[0.9995285,0.0001688298,0.0001003442,0.00002514774,0.0000768804,0.0001003615],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0001795042,0.0002232646,0.03394605,0.0004349805,0.00003805324,0.1479699,0.002959353,0.0001677141,0.002628383,0.005632895,0.637402,0.1684179],"study_design_scores_gemma":[0.00004938513,0.000217933,0.01129623,0.0007604402,0.00003305578,0.1736304,0.003751301,0.0004560638,0.0005637268,0.01105807,0.7981459,0.00003751641],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.05097941,0.03696962,0.002215372,0.739265,0.02341758,0.0002370964,0.0005372724,0.0006198076,0.1457589],"genre_scores_gemma":[0.3091279,0.05896739,0.004732732,0.546096,0.03711299,0.0002468237,0.0004106799,0.0001367197,0.04316875],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008315936,"threshold_uncertainty_score":0.02781963,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01714929267376839,"score_gpt":0.2565026970860845,"score_spread":0.2393534044123161,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}