{"id":"W2891825984","doi":"10.3390/agronomy8090180","title":"Shaping Plant Adaptability, Genome Structure and Gene Expression through Transposable Element Epigenetic Control: Focus on Methylation","year":2018,"lang":"en","type":"article","venue":"Agronomy","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Pontificia Universidad Javeriana","keywords":"Biology; Transposable element; Epigenetics; Genetics; DNA methylation; Genome evolution; Genome; Gene; Gene silencing; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00008647514,0.0001282833,0.0001361044,0.000006536642,0.0002834043,0.0000445709,0.00010184,0.00006985664,0.0009312628],"category_scores_gemma":[0.000006774272,0.00005305335,0.00004079651,0.00008471938,0.00005475424,0.00008314649,0.0000269832,0.0000574066,0.00001358548],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002246232,"about_ca_system_score_gemma":0.000007159012,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001624025,"about_ca_topic_score_gemma":0.0006021615,"domain_scores_codex":[0.999109,0.00006248133,0.000185102,0.000314847,0.0001228916,0.0002056926],"domain_scores_gemma":[0.9996829,0.00008928914,0.00006047174,0.00006391618,0.00003907428,0.00006434628],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005586611,0.00004968435,0.007385011,0.000004102444,0.00002093189,6.987535e-7,0.000428892,0.00008458573,0.9768302,0.0006134494,0.00002031171,0.01450621],"study_design_scores_gemma":[0.0008097038,0.0009879409,0.6127629,0.00003091551,0.0000494215,0.000005649623,0.0001321294,0.0004408637,0.3443969,0.02149046,0.01852064,0.0003724737],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969794,0.000397995,0.00054405,0.001020228,0.00006154175,0.000344312,0.0001824997,0.00002836283,0.0004416288],"genre_scores_gemma":[0.9978461,0.00003019306,0.001503118,0.0001250939,0.0003531775,0.00001870244,0.00009913481,0.000001112094,0.00002341774],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6324333,"threshold_uncertainty_score":0.999982,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02612651624453233,"score_gpt":0.2219450232518997,"score_spread":0.1958185070073674,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}